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Relation extraction is essential for extracting and understanding biographical information in the context of digital humanities and related subjects. There is a growing interest in the community to build datasets capable of training machine…

Computation and Language · Computer Science 2024-03-28 Alistair Plum , Tharindu Ranasinghe , Christoph Purschke

This paper presents a reinforcement learning approach to extract noise in long clinical documents for the task of readmission prediction after kidney transplant. We face the challenges of developing robust models on a small dataset where…

Computation and Language · Computer Science 2020-05-26 Liyan Xu , Julien Hogan , Rachel E. Patzer , Jinho D. Choi

This paper addresses the challenges posed by the unstructured nature and high-dimensional semantic complexity of electronic health record texts. A deep learning method based on attention mechanisms is proposed to achieve unified modeling…

Computation and Language · Computer Science 2025-07-03 Ting Xu , Xiaoxiao Deng , Xiandong Meng , Haifeng Yang , Yan Wu

BERT is inefficient for sentence-pair tasks such as clustering or semantic search as it needs to evaluate combinatorially many sentence pairs which is very time-consuming. Sentence BERT (SBERT) attempted to solve this challenge by learning…

Computation and Language · Computer Science 2021-02-08 Yan Zhang , Ruidan He , Zuozhu Liu , Kwan Hui Lim , Lidong Bing

Neural network representation learning frameworks have recently shown to be highly effective at a wide range of tasks ranging from radiography interpretation via data-driven diagnostics to clinical decision support. This often superior…

Information Retrieval · Computer Science 2018-11-14 Xing Wei , Carsten Eickhoff

Clinical information extraction, which involves structuring clinical concepts from unstructured medical text, remains a challenging problem that could benefit from the inclusion of tabular background information available in electronic…

Artificial Intelligence · Computer Science 2025-12-10 Paloma Rabaey , Stefan Heytens , Thomas Demeester

Biomedical triple extraction systems aim to automatically extract biomedical entities and relations between entities. The exploration of applying large language models (LLM) to triple extraction is still relatively unexplored. In this work,…

Computation and Language · Computer Science 2024-04-30 Mingchen Li , Huixue Zhou , Rui Zhang

The emergence of structured databases for Question Answering (QA) systems has led to developing methods, in which the problem of learning the correct answer efficiently is based on a linking task between the constituents of the question and…

Machine Learning · Computer Science 2020-03-05 Hamid Zafar , Maryam Tavakol , Jens Lehmann

With the rapid growth of research publications, there is a vast amount of scholarly knowledge that needs to be organized in digital libraries. To deal with this challenge, techniques relying on knowledge-graph structures are being…

Digital Libraries · Computer Science 2020-07-14 Ming Jiang , Jennifer D'Souza , Sören Auer , J. Stephen Downie

Learning representations for knowledge base entities and concepts is becoming increasingly important for NLP applications. However, recent entity embedding methods have relied on structured resources that are expensive to create for new…

Computation and Language · Computer Science 2018-07-11 Denis Newman-Griffis , Albert M. Lai , Eric Fosler-Lussier

With the explosive growth of biomedical literature, designing automatic tools to extract information from the literature has great significance in biomedical research. Recently, transformer-based BERT models adapted to the biomedical domain…

Computation and Language · Computer Science 2020-11-03 Peng Su , K. Vijay-Shanker

In recent years, distantly-supervised relation extraction has achieved a certain success by using deep neural networks. Distant Supervision (DS) can automatically generate large-scale annotated data by aligning entity pairs from Knowledge…

Computation and Language · Computer Science 2020-11-02 Tong Zhu , Haitao Wang , Junjie Yu , Xiabing Zhou , Wenliang Chen , Wei Zhang , Min Zhang

In recent years there is a surge of interest in applying distant supervision (DS) to automatically generate training data for relation extraction (RE). In this paper, we study the problem what limits the performance of DS-trained neural…

Computation and Language · Computer Science 2019-09-11 Qinyuan Ye , Liyuan Liu , Maosen Zhang , Xiang Ren

Label noise in the sense of incorrect labels is present in many real-world data sets and is known to severely limit the generalizability of deep learning models. In the field of remote sensing, however, automated treatment of label noise in…

Computer Vision and Pattern Recognition · Computer Science 2026-03-18 Felix Kröber , Genc Hoxha , Ribana Roscher

The amount of data for processing and categorization grows at an ever increasing rate. At the same time the demand for collaboration and transparency in organizations, government and businesses, drives the release of data from internal…

Machine Learning · Computer Science 2020-08-26 Jan Neerbek

Understanding the meaning of text often involves reasoning about entities and their relationships. This requires identifying textual mentions of entities, linking them to a canonical concept, and discerning their relationships. These tasks…

Computation and Language · Computer Science 2019-12-04 Trapit Bansal , Pat Verga , Neha Choudhary , Andrew McCallum

Relation extraction is a fundamental task in information extraction. Most existing methods have heavy reliance on annotations labeled by human experts, which are costly and time-consuming. To overcome this drawback, we propose a novel…

Computation and Language · Computer Science 2017-08-03 Liyuan Liu , Xiang Ren , Qi Zhu , Shi Zhi , Huan Gui , Heng Ji , Jiawei Han

Lack of training data presents a grand challenge to scaling out spoken language understanding (SLU) to low-resource languages. Although various data augmentation approaches have been proposed to synthesize training data in low-resource…

Computation and Language · Computer Science 2021-09-06 Yingmei Guo , Linjun Shou , Jian Pei , Ming Gong , Mingxing Xu , Zhiyong Wu , Daxin Jiang

In this paper, we report our method for the Information Extraction task in 2019 Language and Intelligence Challenge. We incorporate BERT into the multi-head selection framework for joint entity-relation extraction. This model extends…

Computation and Language · Computer Science 2019-09-27 Weipeng Huang , Xingyi Cheng , Taifeng Wang , Wei Chu

Distant supervision (DS) aims to generate large-scale heuristic labeling corpus, which is widely used for neural relation extraction currently. However, it heavily suffers from noisy labeling and long-tail distributions problem. Many…

Computation and Language · Computer Science 2021-02-03 Jianing Wang