English
Related papers

Related papers: Links, bridge number, and width trees

200 papers

Tree-based networks are a class of phylogenetic networks that attempt to formally capture what is meant by "tree-like" evolution. A given non-tree-based phylogenetic network, however, might appear to be very close to being tree-based, or…

Populations and Evolution · Quantitative Biology 2020-01-17 Mareike Fischer , Andrew Francis

We study random $k$-connected chordal graphs with bounded tree-width. Our main results are scaling limits and quenched local limits.

Probability · Mathematics 2025-02-07 Jordi Castellví , Benedikt Stufler

A graph is odd if all of its vertices have odd degrees. In particular, an odd spanning tree in a connected graph is a spanning tree in which all vertices have odd degrees. In this paper we establish a unified technique to enumerate odd…

Combinatorics · Mathematics 2026-02-10 Shaohan Xu , Kexiang Xu

We study configuration space integral formulas for Milnor's homotopy link invariants, showing that they are in correspondence with certain linear combinations of trivalent trees. Our proof is essentially a combinatorial analysis of a…

Algebraic Topology · Mathematics 2021-06-23 Robin Koytcheff , Ismar Volic

We investigate connections between biquandle colorings, quiver enhancements, and several notions of the bridge numbers $b_i(K)$ for virtual links, where $i=1,2$. We show that for any positive integers $m \leq n$, there exists a virtual link…

Geometric Topology · Mathematics 2025-04-15 Tirasan Khandhawit , Puttipong Pongtanapaisan , Brandon Wang

Phylogenetic networks which are, as opposed to trees, suitable to describe processes like hybridization and horizontal gene transfer, play a substantial role in evolutionary research. However, while non-treelike events need to be taken into…

Populations and Evolution · Quantitative Biology 2022-07-06 Mareike Fischer , Tom Niklas Hamann , Kristina Wicke

We give a simple proof that the straightforward generalisation of clique-width to arbitrary structures can be unbounded on structures of bounded tree-width. This can be corrected by allowing fusion of elements.

Logic in Computer Science · Computer Science 2008-06-03 Hans Adler , Isolde Adler

We introduce and study so-called self-indexed graphs. These are (oriented) finite graphs endowed with a map from the set of edges to the set of vertices. Such graphs naturally arise from classical knot and link diagrams. In fact, the graphs…

Geometric Topology · Mathematics 2007-05-23 Matias Graña , Vladimir Turaev

We characterise digraphs of directed treewidth one in terms of forbidden butterfly minors. Moreover, we show that there is a linear relation between the hypertree-width of the dual of the cycle hypergraph of D, i. e. the hypergraph with…

Combinatorics · Mathematics 2019-10-07 Sebastian Wiederrecht

We study the gordian graph of all knots in $\R^3$: two knots are adjacent if they differ by a single crossing change. We prove that this graph contains isometrically an infinite countable tree with infinite valency, and that the complement…

Geometric Topology · Mathematics 2007-05-23 Julien Marche

The following theorem is proved: For all $k$-connected graphs $G$ and $H$ each with at least $n$ vertices, the treewidth of the cartesian product of $G$ and $H$ is at least $k(n -2k+2)-1$. For $n\gg k$ this lower bound is asymptotically…

Combinatorics · Mathematics 2013-10-02 David R. Wood

We study the height of a spanning tree $T$ of a graph $G$ obtained by starting with a single vertex of $G$ and repeatedly selecting, uniformly at random, an edge of $G$ with exactly one endpoint in $T$ and adding this edge to $T$.

Probability · Mathematics 2017-07-05 Luc Devroye , Vida Dujmović , Alan Frieze , Abbas Mehrabian , Pat Morin , Bruce Reed

Using the symplectic geometry of certain manifolds which appear naturally in Lie theory, we define an invariant which assigns a graded abelian group to an oriented link. The relevant manifolds are transverse slices to certain nilpotent…

Symplectic Geometry · Mathematics 2007-05-23 Paul Seidel , Ivan Smith

We provide a finite equational presentation of graphs of treewidth at most three, solving an instanceof an open problem by Courcelle and Engelfriet. We use a syntax generalising series-parallel expressions, denoting graphs with a small…

Logic in Computer Science · Computer Science 2025-01-23 Amina Doumane , Samuel Humeau , Damien Pous

We determine if the width of a graph class ${\cal G}$ changes from unbounded to bounded if we consider only those graphs from ${\cal G}$ whose diameter is bounded. As parameters we consider treedepth, pathwidth, treewidth and clique-width,…

Discrete Mathematics · Computer Science 2025-05-27 Konrad K. Dabrowski , Tala Eagling-Vose , Noleen Köhler , Sebastian Ordyniak , Daniël Paulusma

When considering the number of subtrees of trees, the extremal structures which maximize this number among binary trees and trees with a given maximum degree lead to some interesting facts that correlate to other graphical indices in…

Combinatorics · Mathematics 2012-10-11 Xiu-Mei Zhang , Xiao-Dong Zhang , Daniel Gray , Hua Wang

We present a new theory which describes the collection of all tunnels of tunnel number 1 knots in the 3-sphere (up to orientation-preserving equivalence in the sense of Heegaard splittings) using the disk complex of the genus-2 handlebody…

Geometric Topology · Mathematics 2014-11-11 Sangbum Cho , Darryl McCullough

We define an annular concordance invariant and study its properties. When specialized to braids, this invariant gives bounds on band rank. We introduce a modified chain complex to reformulate the invariant. Then, by focusing on a special…

Geometric Topology · Mathematics 2023-01-26 Apratim Chakraborty

Birmele [J. Graph Theory, 2003] proved that every graph with circumference t has treewidth at most t-1. Under the additional assumption of 2-connectivity, such graphs have bounded pathwidth, which is a qualitatively stronger result.…

Combinatorics · Mathematics 2015-06-08 Emily A. Marshall , David R. Wood

We continue to develop an obstruction theory for embedding 2-spheres into 4-manifolds in terms of Whitney towers. The proposed intersection invariants take values in certain graded abelian groups generated by labelled trivalent trees, and…

Geometric Topology · Mathematics 2007-05-23 Rob Schneiderman , Peter Teichner