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Inspired by recent experiments on the spatial organization of bacterial chromosomes, we consider a type of "bottle brush" polymer consisting of a flexible backbone chain, to which flexible side loops are connected. We show that such a model…

Biological Physics · Physics 2012-07-10 Debasish Chaudhuri , Bela M. Mulder

Colloidal particles dispersed in liquid crystals can form new materials with tunable elastic and electro-optic properties. In a periodic `blue phase' host, particles should template into colloidal crystals with potential uses in photonics,…

Soft Condensed Matter · Physics 2015-04-21 K. Stratford , O. Henrich , J. S. Lintuvuori , M. E. Cates , D. Marenduzzo

The Slinky is a well-known example of a highly flexible helical spring, exhibiting large, geometrically nonlinear deformations from minimal applied forces. By considering it as a system of coils that act to resist axial, shearing, and…

Soft Condensed Matter · Physics 2015-06-19 Douglas P. Holmes , Andy D. Borum , Billy F. Moore , Raymond H. Plaut , David A. Dillard

Helically coiled filaments are a frequent motif in nature. In situations commonly encountered in experiments coiled helices are squeezed flat onto two dimensional surfaces. Under such 2-D confinement helices form "squeelices" - peculiar…

Soft Condensed Matter · Physics 2015-06-05 Gi-Moon Nam , Nam-Kyung Lee , Hervé Mohrbach , Albert Johner , Igor M. Kulić

Steady structures originating from dynamic self-assembly have begun to show their advantages in new generation materials, and pose challenges to equilibrium self-assembly. In view of the important role of confinement in self-assembly, here,…

Computational Physics · Physics 2019-08-06 Rui-fen Zhang , Chun-lai Ren , Jia-wei Feng , Yu-qiang Ma

The occurrence of coiled or helical morphologies is common in nature, from plant roots to DNA packaging into viral capsids, as well as in applications such as oil drilling processes. In many examples, chiral structures result from the…

Force-induced reversible transformations between coiled and normal polymorphs of bacterial flagella have been observed in recent optical-tweezer experiment. We introduce a discrete elastic rod model with two competing helical states…

Soft Condensed Matter · Physics 2008-04-08 Hirofumi Wada , Roland R. Netz

Helical ribbons arise in many biological and engineered systems, often driven by anisotropic surface stress, residual strain, and geometric or elastic mismatch between layers of a laminated composite. A full mathematical analysis is…

Mathematical Physics · Physics 2012-09-18 Zi Chen , Carmel Majidi , David J. Srolovitz , Mikko Haataja

We formulate a new geometrical string on the euclidean lattice. It is possible to find such spin systems with local interaction which reproduce the same surface dynamics.In the three-dimensional case this spin system is a usual Ising…

High Energy Physics - Theory · Physics 2009-10-22 G. K. Savvidy , F. J. Wegner

We systematically study phase transformations from one helical structure to another. Motivated in part by recent work that relates the presence of compatible interfaces with properties such as the hysteresis and reversibility of a phase…

Soft Condensed Matter · Physics 2019-07-24 Fan Feng , Paul Plucinsky , Richard D. James

Generic interactions e.g. the Coulomb or other long ranged radially symmetric repulsive interactions between monomers of bead-spring model of a semi-flexible polymer induce instabilities in a initially straight polymer chain to form long…

Soft Condensed Matter · Physics 2020-12-30 Debarshi Mitra , Apratim Chatterji

A typical protein structure is a compact packing of connected alpha-helices and/or beta-strands. We have developed a method for generating the ensemble of compact structures a given set of helices and strands can form. The method is tested…

Statistical Mechanics · Physics 2009-11-07 Eldon Emberly , Ned Wingreen , Chao Tang

Embedded vortices in turbulent wall-bounded flow over a flat plate, generated by a passive rectangular vane-type vortex generator with variable angle $\beta$ to the incoming flow in a low-Reynolds number flow ($Re=2600$ based on the inlet…

Fluid Dynamics · Physics 2019-06-18 Clara M. Velte , Martin O. L. Hansen , Valery L. Okulov

Manipulating the way in which colloidal particles self-organise is a central challenge in the design of functional soft materials. Meeting this challenge requires the use of building blocks that interact with one another in a highly…

Soft Condensed Matter · Physics 2021-03-30 Joe G Donaldson , Peter Schall , Laura Rossi

Natural materials often feature a combination of soft and stiff phases, arranged to achieve excellent mechanical properties, such as high strength and toughness. Many natural materials have even independently evolved to have similar…

Soft Condensed Matter · Physics 2025-07-03 Chelsea Fox , Kyrillos Bastawros , Tommaso Magrini , Chiara Daraio

Self-assembly of structures from vertically aligned, charged dust particle bundles within a glass box placed on the lower, powered electrode of a RF GEC cell were produced and examined experimentally. Self-organized formation of…

Plasma Physics · Physics 2015-06-15 Truell W. Hyde , Jie Kong , Lorin S. Matthews

Mechanical instabilities can be exploited to design innovative structures, able to change their shape in the presence of external stimuli. In this work, we derive a mathematical model of an elastic beam subjected to an axial force and…

Soft Condensed Matter · Physics 2022-12-07 Davide Riccobelli , Giovanni Noselli , Antonio DeSimone

Helices are not generic outcomes of polymer collapse. Collapsed conformations of semiflexible polymers with isotropic attractions typically form globules, toroids, or rod-like structures, as seen in simulations and described by…

Statistical Mechanics · Physics 2026-03-31 Biman Bagchi

Helical objects are often implemented in electronic or mechanical micro-systems, requiring a precise understanding of their mechanical properties. While helices formed by cylindrical filaments have been intensely investigated, little is…

Applied Physics · Physics 2022-08-22 Lucas Prévost , Anke Lindner , Olivia du Roure

Self-shaping of curved structures, especially those involving flexible thin layers, has attracted increasing attention because of their broad potential applications in e.g. nanoelectromechanical/micro-electromechanical systems (NEMS/MEMS),…

Soft Condensed Matter · Physics 2015-12-17 Zi Chen , Gaoshan Huang , Ian Trase , Xiaomin Han , Yongfeng Mei