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Diagnosis of fungal infections can rely on microscopic examination, however, in many cases, it does not allow unambiguous identification of the species due to their visual similarity. Therefore, it is usually necessary to use additional…

Computer Vision and Pattern Recognition · Computer Science 2020-10-14 Bartosz Zieliński , Agnieszka Sroka-Oleksiak , Dawid Rymarczyk , Adam Piekarczyk , Monika Brzychczy-Włoch

Traditionally, diagnosis and treatment of fungal infections in humans depend heavily on face-to-face consultations or examinations made by specialized laboratory scientists known as mycologists. In many cases, such as the recent…

Image and Video Processing · Electrical Eng. & Systems 2021-09-16 Camilo Javier Pineda Sopo , Farshid Hajati , Soheila Gheisari

Automated recognition and classification of bacteria species from microscopic images have significant importance in clinical microbiology. Bacteria classification is usually carried out manually by biologists using different shapes and…

Quantitative Methods · Quantitative Biology 2019-12-19 Muhammed Talo

Microtubule networks (MTs) are a component of a cell that may indicate the presence of various chemical compounds and can be used to recognize properties such as treatment resistance. Therefore, the classification of MT images is of great…

Image and Video Processing · Electrical Eng. & Systems 2020-12-23 Aleksei Shpilman , Dmitry Boikiy , Marina Polyakova , Daniel Kudenko , Anton Burakov , Elena Nadezhdina

FungiCLEF 2024 addresses the fine-grained visual categorization (FGVC) of fungi species, with a focus on identifying poisonous species. This task is challenging due to the size and class imbalance of the dataset, subtle inter-class…

Computer Vision and Pattern Recognition · Computer Science 2024-07-11 Christopher Chiu , Maximilian Heil , Teresa Kim , Anthony Miyaguchi

Microorganisms play a vital role in human life. Therefore, microorganism detection is of great significance to human beings. However, the traditional manual microscopic detection methods have the disadvantages of long detection cycle, low…

Computer Vision and Pattern Recognition · Computer Science 2022-04-12 Pingli Ma , Chen Li , Md Mamunur Rahaman , Yudong Yao , Jiawei Zhang , Shuojia Zou , Xin Zhao , Marcin Grzegorzek

Artificial intelligence is nowadays used for cell detection and classification in optical microscopy, during post-acquisition analysis. The microscopes are now fully automated and next expected to be smart, to make acquisition decisions…

Sepsis is a life-threatening condition which requires rapid diagnosis and treatment. Traditional microbiological methods are time-consuming and expensive. In response to these challenges, deep learning algorithms were developed to identify…

The target of this paper is to recommend a way for Automated classification of Fish species. A high accuracy fish classification is required for greater understanding of fish behavior in Ichthyology and by marine biologists. Maintaining a…

Computer Vision and Pattern Recognition · Computer Science 2018-05-28 Dhruv Rathi , Sushant Jain , Dr. S. Indu

Fine-grained image classification (FGIC) is a challenging task in computer vision for due to small visual differences among inter-subcategories, but, large intra-class variations. Deep learning methods have achieved remarkable success in…

Computer Vision and Pattern Recognition · Computer Science 2024-04-02 Asish Bera , Debotosh Bhattacharjee , Mita Nasipuri

Addressing plant diseases and pests is critical for enhancing crop production and preventing economic losses. Recent advances in artificial intelligence (AI), machine learning (ML), and deep learning (DL) have significantly improved the…

Computer Vision and Pattern Recognition · Computer Science 2025-08-13 Saptarshi Banerjee , Tausif Mallick , Amlan Chakroborty , Himadri Nath Saha , Nityananda T. Takur

Identification of plant disease is usually done through visual inspection or during laboratory examination which causes delays resulting in yield loss by the time identification is complete. On the other hand, complex deep learning models…

Computer Vision and Pattern Recognition · Computer Science 2021-02-10 Nisar Ahmed , Hafiz Muhammad Shahzad Asif , Gulshan Saleem

Molecular and morphological characters, as important parts of biological taxonomy, are contradictory but need to be integrated. Organism's image recognition and bioinformatics are emerging and hot problems nowadays but with a gap between…

Computer Vision and Pattern Recognition · Computer Science 2022-06-29 Jiewen Xiao , Wenbin Liao , Ming Zhang , Jing Wang , Jianxin Wang , Yihua Yang

Deep learning is currently the most important branch of machine learning, with applications in speech recognition, computer vision, image classification, and medical imaging analysis. Plant recognition is one of the areas where image…

Computer Vision and Pattern Recognition · Computer Science 2022-09-08 Thiru Siddharth , Bhupendra Singh Kirar , Dheeraj Kumar Agrawal

Accurate identification of fungi species presents a unique challenge in computer vision due to fine-grained inter-species variation and high intra-species variation. This paper presents our approach for the FungiCLEF 2025 competition, which…

Computer Vision and Pattern Recognition · Computer Science 2025-07-14 Jason Kahei Tam , Murilo Gustineli , Anthony Miyaguchi

In this work, we present an ensemble of descriptors for the classification of transmission electron microscopy images of viruses. We propose to combine handcrafted and deep learning approaches for virus image classification. The set of…

Computer Vision and Pattern Recognition · Computer Science 2021-12-28 Loris Nanni , Eugenio De Luca , Marco Ludovico Facin , Gianluca Maguolo

The FungiCLEF 2025 competition addresses the challenge of automatic fungal species recognition using realistic, field-collected observational data. Accurate identification tools support both mycologists and citizen scientists, greatly…

Computer Vision and Pattern Recognition · Computer Science 2025-09-16 Abdarahmane Traore , Éric Hervet , Andy Couturier

Fine-grained classification of microscopic image data with limited samples is an open problem in computer vision and biomedical imaging. Deep learning based vision systems mostly deal with high number of low-resolution images, whereas…

Computer Vision and Pattern Recognition · Computer Science 2020-10-07 Mengran Fan , Tapabrata Chakrabort , Eric I-Chao Chang , Yan Xu , Jens Rittscher

Analysis of microscopy images is one important tool in many fields of biomedical research, as it allows the quantification of a multitude of parameters at the cellular level. However, manual counting of these images is both tiring and…

Computer Vision and Pattern Recognition · Computer Science 2013-11-13 P. A Nogueira

We have developed a methodology for the systematic generation of a large image dataset of macerated wood references, which we used to generate image data for nine hardwood genera. This is the basis for a substantial approach to automate,…

Computer Vision and Pattern Recognition · Computer Science 2023-07-26 Lars Nieradzik , Jördis Sieburg-Rockel , Stephanie Helmling , Janis Keuper , Thomas Weibel , Andrea Olbrich , Henrike Stephani
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