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Related papers: Trialstreamer: Mapping and Browsing Medical Eviden…

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We present TrialsSummarizer, a system that aims to automatically summarize evidence presented in the set of randomized controlled trials most relevant to a given query. Building on prior work, the system retrieves trial publications…

Computation and Language · Computer Science 2023-03-10 Sanjana Ramprasad , Denis Jered McInerney , Iain J. Marshal , Byron C. Wallace

The rapid digitization of real-world data presents an unprecedented opportunity to optimize healthcare delivery and accelerate biomedical discovery. However, these data are often found in unstructured forms such as clinical notes in…

Hospitals around the world collect massive amounts of physiological data from their patients every day. Recently, there has been an increase in research interest to subject this data to statistical analysis to gain more insights and provide…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-04 Anand Jayarajan , Kimberly Hau , Andrew Goodwin , Gennady Pekhimenko

The best evidence concerning comparative treatment effectiveness comes from clinical trials, the results of which are reported in unstructured articles. Medical experts must manually extract information from articles to inform…

Computation and Language · Computer Science 2022-01-11 Benjamin E. Nye , Jay DeYoung , Eric Lehman , Ani Nenkova , Iain J. Marshall , Byron C. Wallace

How do we most effectively treat a disease or condition? Ideally, we could consult a database of evidence gleaned from clinical trials to answer such questions. Unfortunately, no such database exists; clinical trial results are instead…

Computation and Language · Computer Science 2020-05-15 Jay DeYoung , Eric Lehman , Ben Nye , Iain J. Marshall , Byron C. Wallace

We present ClinicalTrialsHub, an interactive search-focused platform that consolidates all data from ClinicalTrials.gov and augments it by automatically extracting and structuring trial-relevant information from PubMed research articles.…

Computation and Language · Computer Science 2026-03-20 Jiwoo Park , Ruoqi Liu , Avani Jagdale , Andrew Srisuwananukorn , Jing Zhao , Lang Li , Ping Zhang , Sachin Kumar

Clinical evidence underpins informed healthcare decisions, yet integrating it into real-time practice remains challenging due to intensive workloads, complex procedures, and time constraints. This study presents Quicker, an LLM-powered…

Systematic use of the published results of randomized clinical trials is increasingly important in evidence-based medicine. In order to collate and analyze the results from potentially numerous trials, evidence tables are used to represent…

Computation and Language · Computer Science 2015-09-18 Antonio Trenta , Anthony Hunter , Sebastian Riedel

Clinical trials offer a fundamental opportunity to discover new treatments and advance the medical knowledge. However, the uncertainty of the outcome of a trial can lead to unforeseen costs and setbacks. In this study, we propose a new…

Computation and Language · Computer Science 2022-04-04 Georgios Katsimpras , Georgios Paliouras

Evidence-based medicine, the practice in which healthcare professionals refer to the best available evidence when making decisions, forms the foundation of modern healthcare. However, it relies on labour-intensive systematic reviews, where…

Computation and Language · Computer Science 2021-12-13 Jetsun Whitton , Anthony Hunter

To reduce the large amount of time spent screening, identifying, and recruiting patients into clinical trials, we need prescreening systems that are able to automate the data extraction and decision-making tasks that are typically relegated…

Computation and Language · Computer Science 2016-09-07 Abhishek Kalyan Adupa , Ravi Prakash Garg , Jessica Corona-Cox , Sanjiv. J. Shah , Siddhartha R. Jonnalagadda

For users navigating travel e-commerce websites, the process of researching products and making a purchase often results in intricate browsing patterns that span numerous sessions over an extended period of time. The resulting clickstream…

Information Retrieval · Computer Science 2024-09-23 William Black , Alexander Manlove , Jack Pennington , Andrea Marchini , Ercument Ilhan , Vilda Markeviciute

With the advancement in the technology sector spanning over every field, a huge influx of information is inevitable. Among all the opportunities that the advancements in the technology have brought, one of them is to propose efficient…

Information Retrieval · Computer Science 2021-12-14 Sudhanshu , Narinder Singh Punn , Sanjay Kumar Sonbhadra , Sonali Agarwal

Eligibility criteria play a critical role in clinical trials by determining the target patient population, which significantly influences the outcomes of medical interventions. However, current approaches for designing eligibility criteria…

Human-Computer Interaction · Computer Science 2025-07-17 Rui Sheng , Xingbo Wang , Jiachen Wang , Xiaofu Jin , Zhonghua Sheng , Zhenxing Xu , Suraj Rajendran , Huamin Qu , Fei Wang

As a future trend of healthcare, personalized medicine tailors medical treatments to individual patients. It requires to identify a subset of patients with the best response to treatment. The subset can be defined by a biomarker (e.g.…

Methodology · Statistics 2021-08-16 Yitao Lu , Julie Zhou , Li Xing , Xuekui Zhang

We present EviSearch, a multi-agent extraction system that automates the creation of ontology-aligned clinical evidence tables directly from native trial PDFs while guaranteeing per-cell provenance for audit and human verification.…

Modern biomedical applications often involve time-series data, from high-throughput phenotyping of model organisms, through to individual disease diagnosis and treatment using biomedical data streams. Data and tools for time-series analysis…

Databases · Computer Science 2019-05-06 Ben D. Fulcher , Carl H. Lubba , Sarab S. Sethi , Nick S. Jones

Synthesizing clinical evidence largely relies on systematic reviews of clinical trials and retrospective analyses from medical literature. However, the rapid expansion of publications presents challenges in efficiently identifying,…

Computation and Language · Computer Science 2024-10-30 Zifeng Wang , Lang Cao , Benjamin Danek , Qiao Jin , Zhiyong Lu , Jimeng Sun

In real-world contexts, sometimes data are available in form of Natural Data Streams, i.e. data characterized by a streaming nature, unbalanced distribution, data drift over a long time frame and strong correlation of samples in short time…

Computer Vision and Pattern Recognition · Computer Science 2023-01-10 Guido Borghi , Gabriele Graffieti , Davide Maltoni

Randomized controlled trials (RCT) are the gold standards for evaluating the efficacy and safety of therapeutic interventions in human subjects. In addition to the pre-specified endpoints, trial participants' experience reveals the time…

Human-Computer Interaction · Computer Science 2024-01-31 Zuotian Li , Xiang Liu , Zelei Cheng , Yingjie Chen , Wanzhu Tu , Jing Su
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