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This paper introduces cuHALLaR, a GPU-accelerated implementation of the HALLaR method proposed in Monteiro et al. 2024 for solving large-scale semidefinite programming (SDP) problems. We demonstrate how our Julia-based implementation…

The complex regulatory dynamics of a biological network can be succinctly captured using discrete logic models. Given even sparse time-course data from the system of interest, previous work has shown that global optimization schemes are…

Molecular Networks · Quantitative Biology 2026-04-22 Joyce Reimer , Pranta Saha , Chris Chen , Neeraj Dhar , Brook Byrns , Steven Rayan , Gordon Broderick

Evolutionary algorithms (EAs) are increasingly implemented on graphics processing units (GPUs) to leverage parallel processing capabilities for enhanced efficiency. However, existing studies largely emphasize the raw speedup obtained by…

Neural and Evolutionary Computing · Computer Science 2026-01-28 Xinmeng Yu , Tao Jiang , Ran Cheng , Yaochu Jin , Kay Chen Tan

Unsustainable exploitation of the oceans exacerbated by global warming is threatening coastal communities worldwide. Accurate and timely monitoring of maritime activity is an essential step to effective governance and to inform future…

Machine Learning · Computer Science 2025-04-29 Henry Herzog , Joshua Hansen , Yawen Zhang , Patrick Beukema

In this article we study the suitability of dierent computational accelerators for the task of real-time data processing. The algorithm used for comparison is the polyphase filter, a standard tool in signal processing and a well established…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-11-14 Karel Adámek , Jan Novotný , Wes Armour

Existing works on cell-free systems consider either coherent or non-coherent downlink data transmission and a network deployment with a single central processing unit (CPU). While it is known that coherent transmission outperforms…

Information Theory · Computer Science 2022-12-29 Roberto P. Antonioli , Iran M. Braga , Gabor Fodor , Yuri C. B. Silva , Walter C. Freitas

Advanced Driver Assistance Systems (ADAS) and Autonomous Driving (AD) bring unprecedented performance requirements for automotive systems. Graphic Processing Unit (GPU) based platforms have been deployed with the aim of meeting these…

Hardware Architecture · Computer Science 2021-04-19 Hamid Tabani , Fabio Mazzocchetti , Pedro Benedicte , Jaume Abella , Francisco J. Cazorla

The growing disparity between CPU core counts and available memory bandwidth has intensified memory contention in servers. This particularly affects highly parallelizable applications, which must achieve efficient cache utilization to…

Hardware Architecture · Computer Science 2025-03-17 Alessandro Fogli , Bo Zhao , Peter Pietzuch , Jana Giceva

We present an approach for integrating the time evolution of quantum systems. We leverage the computation power of graphics processing units (GPUs) to perform the integration of all time steps in parallel. The performance boost is…

Numerical Analysis · Mathematics 2021-10-06 Konstantin Herb , Pol Welter

The ATLAS experiment at the Large Hadron Collider has a broad physics programme ranging from precision measurements to direct searches for new particles and new interactions, requiring ever larger and ever more accurate datasets of…

High Energy Physics - Experiment · Physics 2024-11-25 ATLAS Collaboration

In this work, we survey the role of GPUs in real-time systems. Originally designed for parallel graphics workloads, GPUs are now widely used in time-critical applications such as machine learning, autonomous vehicles, and robotics due to…

This paper presents the design and simulation results of a gigabit transceiver Application Specific Integrated Circuit (ASIC) called GBCR for the ATLAS Inner Tracker (ITk) Pixel detector readout upgrade. GBCR has four upstream receiver…

Instrumentation and Detectors · Physics 2020-09-15 C. Chen , V. Wallangen , D. Gong , C. Grace , Q. Sun , D. Guo , G. Huang , S. Kulis , P. Leroux , C. Liu , T. Liu , P. Moreira , J. Prinzie , L. Xiao , J. Ye

The Ant Colony System (ACS) is, next to Ant Colony Optimization (ACO) and the MAX-MIN Ant System (MMAS), one of the most efficient metaheuristic algorithms inspired by the behavior of ants. In this article we present three novel parallel…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-08 Rafał Skinderowicz

GPU-based HPC clusters are attracting more scientific application developers due to their extensive parallelism and energy efficiency. In order to achieve portability among a variety of multi/many core architectures, a popular choice for an…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-10 Ali TehraniJamsaz , Alok Mishra , Akash Dutta , Abid M. Malik , Barbara Chapman , Ali Jannesari

Linear Programming (LP) is a foundational optimization technique with widespread applications in finance, energy trading, and supply chain logistics. However, traditional Central Processing Unit (CPU)-based LP solvers often struggle to meet…

Optimization and Control · Mathematics 2025-08-26 Xiyan Hu , Titus Parker , Connor Phillips , Yifa Yu

The energy footprint of global data movement has surpassed 100 terawatt hours, costing more than 20 billion US dollars to the world economy. Depending on the number of switches, routers, and hubs between the source and destination nodes,…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-04-12 Luigi Di Tacchio , Zulkar Nine , Tevfik Kosar , Fatih M. Bulut , Jinho Hwang

Clawpack is a library for solving nonlinear hyperbolic partial differential equations using high-resolution finite volume methods based on Riemann solvers and limiters. It supports Adaptive Mesh Refinement (AMR), which is essential in…

Mathematical Software · Computer Science 2018-08-09 Xinsheng Qin , Randall J. LeVeque , Michael R. Motley

Speculative decoding has emerged as a powerful method to improve latency and throughput in hosting large language models. However, most existing implementations focus on generating a single sequence. Real-world generative AI applications…

Charged-particle reconstruction is a fundamental part of the event reconstruction in modern multi-purpose high-energy physics detectors. This paper describes the algorithms used to reconstruct charged particles and primary vertices with the…

Instrumentation and Detectors · Physics 2026-05-11 ATLAS Collaboration

Within the last years, Python became more prominent in the scientific community and is now used for simulations, machine learning, and data analysis. All these tasks profit from additional compute power offered by parallelism and…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-26 Andreas Gocht , Robert Schöne , Jan Frenzel