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Hydrodynamic forces may significantly affect the motion of polymers. In sheet-like cavities, such as the cell's cytoplasm and microfluidic channels, the hydrodynamic forces are long-range. It is therefore expected that that hydrodynamic…

Soft Condensed Matter · Physics 2010-08-04 Tsvi Tlusty

In this paper we consider the effect of surface heterogeneity on the slippage of fluid, using two complementary approaches. First, MD simulations of a corrugated hydrophobic surface have been performed. A dewetting transition, leading to a…

Hydrodynamic interactions (HIs) are important in biophysics research because they influence both the collective and the individual behaviour of microorganisms and self-propelled particles. For instance, HIs at the micro-swimmer level…

Fluid Dynamics · Physics 2022-03-30 Maria Tătulea-Codrean , Eric Lauga

The study of interactions between biomimetic membranes and micron-sized particles is crucial for understanding various biological processes. Here, we control microparticle spontaneous engulfment by giant lipid vesicles by tuning particle…

Soft Condensed Matter · Physics 2025-01-22 Clément Marque , Gaetano D'Avino , Domenico Larobina , Aude Michel , Ali Abou-Hassan , Antonio Stocco

In this work we study the spreading dynamics of tiny liquid droplets on solid surfaces in the case where the ends of the molecules feel different interactions with respect to the surface. We consider a simple model of dimers and short…

Condensed Matter · Physics 2009-10-28 M. Haataja , J. A. Nieminen , T. Ala-Nissila

A colloidal particle placed in an inhomogeneous solution of smaller non-adsorbing polymers will move towards regions of lower polymer concentration, in order to reduce the free energy of the interface between the surface of the particle and…

Soft Condensed Matter · Physics 2017-12-13 Richard P. Sear , Patrick B. Warren

When a liquid film of colloidal solution consisting of particles of different sizes is dried on a substrate, the colloids often stratify, where smaller colloids are laid upon larger colloids. This phenomenon is counter intuitive because…

Soft Condensed Matter · Physics 2017-03-20 Jiajia Zhou , Ying Jiang , Masao Doi

The hydrodynamic interactions of a suspension of self-propelled particles are studied using a direct numerical simulation method which simultaneously solves for the host fluid and the swimming particles. A modified version of the "Smoothed…

Soft Condensed Matter · Physics 2013-01-15 John J. Molina , Yasuya Nakayama , Ryoichi Yamamoto

We show that hydrodynamic diffusion is generically present in many-body interacting integrable models. We extend the recently developed generalised hydrodynamic (GHD) to include terms of Navier-Stokes type which lead to positive entropy…

Statistical Mechanics · Physics 2018-10-19 Jacopo De Nardis , Denis Bernard , Benjamin Doyon

A potential strategy for controlling stratification in a drying suspension of bidisperse particles is studied using molecular dynamics simulations. When the suspension is maintained at a constant temperature during fast drying, it can…

Soft Condensed Matter · Physics 2019-03-29 Yanfei Tang , Gary S. Grest , Shengfeng Cheng

We present a study of the spreading of liquid droplets on a solid substrate at very small scales. We focus on the regime where effective wetting energy (binding potential) and surface tension effects significantly influence steady and…

Fluid Dynamics · Physics 2017-02-15 Hanyu Yin , David N. Sibley , Uwe Thiele , Andrew J. Archer

The ballistic deposition of particles by taking hydrodynamic interactions (HI) into account has been studied by means of computer simulations. The radial distribution function of the assembly of particles deposited on a plane has been…

Condensed Matter · Physics 2009-10-28 I. Pagonabarraga , P. Wojtaszczyk , J. M. Rubi , B. Senger , J. -C. Voegel , P. Schaaf

The spreading of polymer droplets is studied using molecular dynamics simulations. To study the dynamics of both the precursor foot and the bulk droplet, large drops of ~200,000 monomers are simulated using a bead-spring model for polymers…

Soft Condensed Matter · Physics 2009-11-10 David R. Heine , Gary S. Grest , Edmund B. Webb

Diffuse-interface theory provides a foundation for the modeling and simulation of microstructure evolution in a very wide range of materials, and for the tracking/capturing of dynamic interfaces between different materials on larger scales.…

Computational Physics · Physics 2018-08-03 Zhijie Xu , Paul Meakin , Alexandre Tartakovsky

The atomisation of suspension containing liquid and dispersed particles is prevalent in many applications. Previous studies of droplet breakup mainly focused on homogeneous fluids, and the heterogeneous effect of particles on the breakup…

Fluid Dynamics · Physics 2024-03-19 Zhikun Xu , Tianyou Wang , Zhizhao Che

We analyzed extensively the dynamics of polymer chains in solutions simulated with dissipative particle dynamics (DPD), with a special focus on the potential influence of a low Schmidt number of a typical DPD fluid on the simulated polymer…

Soft Condensed Matter · Physics 2009-11-11 W. Jiang , J. Huang , Y. Wang , M. Laradji

The hydrodynamic effects of macromolecular crowding inside cells is often studied in vitro by using polymers as crowding reagents. Confinement of polymers inside cell-sized droplets has been shown to affect the diffusion of small molecules.…

Soft Condensed Matter · Physics 2023-04-28 Yaam Deckel , Lauren A. Lowe , Siddharth Rawat , Matthew Turner , James Luong , Anna Wang

Colloidal particles with strong, short-ranged attractions can form a gel. We simulate this process without and with hydrodynamic interactions (HI), using the lattice-Boltzmann method to account for presence of a thermalized solvent. We show…

Soft Condensed Matter · Physics 2018-12-04 Joost de Graaf , Wilson C. K. Poon , Magnus J. Haughey , Michiel Hermes

We explore the impact of hydrodynamic interactions on the conformational and dynamical properties of wet tangentially-driven active polymers using multiparticle collision dynamics simulations. By analyzing active filaments with varying…

Soft Condensed Matter · Physics 2024-10-24 Loek van Steijn , Mohammad Fazelzadeh , Sara Jabbari-Farouji

Large-scale molecular dynamics simulations are used to simulate a layer of nanoparticles diffusing on the surface of a liquid. Both a low viscosity liquid, represented by Lennard-Jones monomers, and a high viscosity liquid, represented by…

Soft Condensed Matter · Physics 2013-01-10 Shengfeng Cheng , Gary S. Grest