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A standard way of approximating or discretizing a metric space is by taking its Rips complexes. These approximations for all parameters are often bound together into a filtration, to which we apply the fundamental group or the first…

Geometric Topology · Mathematics 2020-03-10 Žiga Virk

In this paper we define, implement, and investigate a simplicial complex construction for computing persistent homology of Euclidean point cloud data, which we call the Delaunay-Rips complex (DR). Assigning the Vietoris-Rips weights to…

Computation · Statistics 2023-03-03 Amish Mishra , Francis C. Motta

The \v{C}ech and Rips constructions of persistent homology are stable with respect to perturbations of the input data. However, neither is robust to outliers, and both can be insensitive to topological structure of high-density regions of…

Algebraic Topology · Mathematics 2022-04-29 Andrew J. Blumberg , Michael Lesnick

In the first half this paper, we generalize the theory of layer points for Lesnick- (or degree-Rips-) complexes to the more general context of $\vec{v}$-hierarchical clusterings. Layer points provide a compressed description of a…

Statistics Theory · Mathematics 2021-09-07 Katharine L. M. Adamyk

Typically clustering algorithms provide clustering solutions with prespecified number of clusters. The lack of a priori knowledge on the true number of underlying clusters in the dataset makes it important to have a metric to compare the…

Machine Learning · Computer Science 2018-11-20 Amber Srivastava , Mayank Baranwal , Srinivasa Salapaka

In data clustering, it is often desirable to find not just a single partition into clusters but a sequence of partitions that describes the data at different scales (or levels of coarseness). A natural problem then is to analyse and compare…

Algebraic Topology · Mathematics 2025-04-25 Juni Schindler , Mauricio Barahona

Many datasets can be viewed as a noisy sampling of an underlying space, and tools from topological data analysis can characterize this structure for the purpose of knowledge discovery. One such tool is persistent homology, which provides a…

A novel nonparametric clustering algorithm is proposed using the interpoint distances between the members of the data to reveal the inherent clustering structure existing in the given set of data, where we apply the classical nonparametric…

Methodology · Statistics 2024-09-02 Soumita Modak

This work incorporates topological features via persistence diagrams to classify point cloud data arising from materials science. Persistence diagrams are multisets summarizing the connectedness and holes of given data. A new distance on…

Machine Learning · Statistics 2019-11-11 Vasileios Maroulas , Cassie Putman Micucci , Adam Spannaus

One of the main reasons for topological persistence being useful in data analysis is that it is backed up by a stability (isometry) property: persistence diagrams of $1$-parameter persistence modules are stable in the sense that the…

Computational Geometry · Computer Science 2021-08-18 Tamal K. Dey , Cheng Xin

This paper presents a new clustering algorithm for space-time data based on the concepts of topological data analysis and in particular, persistent homology. Employing persistent homology - a flexible mathematical tool from algebraic…

Machine Learning · Statistics 2019-10-28 Umar Islambekov , Yulia Gel

Individual preference (IP) stability, introduced by Ahmadi et al. (ICML 2022), is a natural clustering objective inspired by stability and fairness constraints. A clustering is $\alpha$-IP stable if the average distance of every data point…

Data Structures and Algorithms · Computer Science 2023-10-02 Anders Aamand , Justin Y. Chen , Allen Liu , Sandeep Silwal , Pattara Sukprasert , Ali Vakilian , Fred Zhang

Clustering is a widely used unsupervised learning method for finding structure in the data. However, the resulting clusters are typically presented without any guarantees on their robustness; slightly changing the used data sample or…

Machine Learning · Statistics 2017-01-02 Andreas Henelius , Kai Puolamäki , Henrik Boström , Panagiotis Papapetrou

Persistent homology has been devised as a promising tool for the topological simplification of complex data. However, it is computationally intractable for large data sets. In this work, we introduce multiresolution persistent homology for…

Biomolecules · Quantitative Biology 2015-04-02 Kelin Xia , Zhixiong Zhao , Guo-Wei Wei

We develop a probabilistic method for assessing the tail behavior and geometric stability of one-dimensional n i.i.d. samples by tracking how their span contracts when the most extreme points are trimmed. Central to our approach is the…

Machine Learning · Statistics 2025-09-03 Erwan Dereure , Emmanuel Akame Mfoumou , David Holcman

Data stream clustering reveals patterns within continuously arriving, potentially unbounded data sequences. Numerous data stream algorithms have been proposed to cluster data streams. The existing data stream clustering algorithms still…

Machine Learning · Computer Science 2025-07-02 Jie Chen , Hua Mao , Yuanbiao Gou , Xi Peng

Deep clustering methods improve the performance of clustering tasks by jointly optimizing deep representation learning and clustering. While numerous deep clustering algorithms have been proposed, most of them rely on artificially…

Machine Learning · Computer Science 2024-01-30 Zhanwen Cheng , Feijiang Li , Jieting Wang , Yuhua Qian

Topological data analysis offers a rich source of valuable information to study vision problems. Yet, so far we lack a theoretically sound connection to popular kernel-based learning techniques, such as kernel SVMs or kernel PCA. In this…

Machine Learning · Statistics 2014-12-24 Jan Reininghaus , Stefan Huber , Ulrich Bauer , Roland Kwitt

In topological data analysis, a point cloud data P extracted from a metric space is often analyzed by computing the persistence diagram or barcodes of a sequence of Rips complexes built on $P$ indexed by a scale parameter. Unfortunately,…

Computational Geometry · Computer Science 2016-09-27 Tamal K. Dey , Dayu Shi , Yusu Wang

The degree-Rips bifiltration is the most computable of the parameter-free, density-sensitive bifiltrations in topological data analysis. It is known that this construction is stable to small perturbations of the input data, but its…

Algebraic Topology · Mathematics 2022-03-17 Alexander Rolle
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