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Graph Transformer has recently received wide attention in the research community with its outstanding performance, yet its structural expressive power has not been well analyzed. Inspired by the connections between Weisfeiler-Lehman (WL)…

Machine Learning · Computer Science 2023-05-24 Wenhao Zhu , Tianyu Wen , Guojie Song , Liang Wang , Bo Zheng

Supervised learning has recently garnered significant attention in the field of computational physics due to its ability to effectively extract complex patterns for tasks like solving partial differential equations, or predicting material…

Machine Learning · Statistics 2024-03-12 Raphaël Carpintero Perez , Sébastien da Veiga , Josselin Garnier , Brian Staber

In this paper, we show that the $(3k+4)$-dimensional Weisfeiler--Leman algorithm can identify graphs of treewidth $k$ in $O(\log n)$ rounds. This improves the result of Grohe & Verbitsky (ICALP 2006), who previously established the…

Data Structures and Algorithms · Computer Science 2024-04-26 Michael Levet , Puck Rombach , Nicholas Sieger

A graph $G = (V,E)$ is a double-threshold graph if there exist a vertex-weight function $w \colon V \to \mathbb{R}$ and two real numbers $\mathtt{lb}, \mathtt{ub} \in \mathbb{R}$ such that $uv \in E$ if and only if $\mathtt{lb} \le…

Data Structures and Algorithms · Computer Science 2021-12-14 Yusuke Kobayashi , Yoshio Okamoto , Yota Otachi , Yushi Uno

A graph is said to be distance-hereditary if the distance function in every connected induced subgraph is the same as in the graph itself. We prove that the ordinary Weisfeiler-Leman algorithm correctly tests the isomorphism of any two…

Combinatorics · Mathematics 2020-05-26 Alexander L. Gavrilyuk , Roman Nedela , Ilia Ponomarenko

Graph Neural Networks (GNNs) are known to match the distinguishing power of the 1-Weisfeiler-Lehman (1-WL) test, and the resulting partitions coincide with the unfolding tree equivalence classes of graphs. Preserving this equivalence, GNNs…

Machine Learning · Computer Science 2025-08-26 Silvia Beddar-Wiesing , Alice Moallemy-Oureh

A hypergraph consists of a set of nodes along with a collection of subsets of the nodes called hyperedges. Higher-order link prediction is the task of predicting the existence of a missing hyperedge in a hypergraph. A hyperedge…

Machine Learning · Computer Science 2024-12-04 Simon Zhang , Cheng Xin , Tamal K. Dey

We prove that the Weisfeiler-Leman (WL) dimension of the class of all finite planar graphs is at most 3. In particular, every finite planar graph is definable in first-order logic with counting using at most 4 variables. The previously best…

Discrete Mathematics · Computer Science 2017-08-25 Sandra Kiefer , Ilia Ponomarenko , Pascal Schweitzer

Graph Neural Networks (GNN) are inherently limited in their expressive power. Recent seminal works (Xu et al., 2019; Morris et al., 2019b) introduced the Weisfeiler-Lehman (WL) hierarchy as a measure of expressive power. Although this…

Machine Learning · Computer Science 2023-06-06 Omri Puny , Derek Lim , Bobak T. Kiani , Haggai Maron , Yaron Lipman

Graph Neural Networks (GNNs) are effective tools for graph representation learning. Most GNNs rely on a recursive neighborhood aggregation scheme, named message passing, thereby their theoretical expressive power is limited to the…

Machine Learning · Computer Science 2023-09-19 Dingmin Wang , Shengchao Liu , Hanchen Wang , Bernardo Cuenca Grau , Linfeng Song , Jian Tang , Song Le , Qi Liu

We introduce the framework of Deep Weisfeiler Leman algorithms (DeepWL), which allows the design of purely combinatorial graph isomorphism tests that are more powerful than the well-known Weisfeiler-Leman algorithm. We prove that, as an…

Logic in Computer Science · Computer Science 2020-03-25 Martin Grohe , Pascal Schweitzer , Daniel Wiebking

We study and compare different Graph Neural Network extensions that increase the expressive power of GNNs beyond the Weisfeiler-Leman test. We focus on (i) GNNs based on higher order WL methods, (ii) GNNs that preprocess small substructures…

Machine Learning · Computer Science 2022-02-01 Pál András Papp , Roger Wattenhofer

The classical Weisfeiler-Leman algorithm aka color refinement is fundamental for graph learning with kernels and neural networks. Originally developed for graph isomorphism testing, the algorithm iteratively refines vertex colors. On many…

Machine Learning · Computer Science 2022-12-09 Franka Bause , Nils M. Kriege

We investigate the power of graph isomorphism algorithms based on algebraic reasoning techniques like Gr\"obner basis computation. The idea of these algorithms is to encode two graphs into a system of equations that are satisfiable if and…

Computational Complexity · Computer Science 2015-02-23 Christoph Berkholz , Martin Grohe

Graph neural networks (GNNs) have been widely used in graph-related contexts. It is known that the separation power of GNNs is equivalent to that of the Weisfeiler-Lehman (WL) test; hence, GNNs are imperfect at identifying all…

Machine Learning · Computer Science 2025-02-07 Ziang Chen , Qiao Zhang , Runzhong Wang

Let $m$ be a positive integer, $X$ a graph with vertex set $\Omega$, and ${\rm WL}_m(X)$ the coloring of the Cartesian $m$-power $\Omega^m$, obtained by the $m$-dimensional Weisfeiler-Leman algorithm. The ${\rm WL}$-dimension of the graph…

Combinatorics · Mathematics 2023-05-30 Haiyan Li , Ilia Ponomarenko , Peter Zeman

The isomorphism problem is a fundamental problem in network analysis, which involves capturing both low-order and high-order structural information. In terms of extracting low-order structural information, graph isomorphism algorithms…

Data Structures and Algorithms · Computer Science 2023-07-28 Yifan Feng , Jiashu Han , Shihui Ying , Yue Gao

Graph problems are fundamentally challenging for large language models (LLMs). While LLMs excel at processing unstructured text, graph tasks require reasoning over explicit structure, permutation invariance, and computationally complex…

Machine Learning · Computer Science 2026-04-23 Angelo Zangari , Peyman Baghershahi , Sourav Medya

A graph $G$ is said to be a $(k,\ell)$-graph if its vertex set can be partitioned into $k$ independent sets and $\ell$ cliques. It is well established that the recognition problem for $(k,\ell)$-graphs is NP-complete whenever $k \geq 3$ or…

Discrete Mathematics · Computer Science 2025-10-21 Flavia Bonomo-Braberman , Min Chih Lin , Ignacio Maqueda

It is known that a graph isomorphism testing algorithm is polynomially equivalent to a detecting of a graph non-trivial automorphism algorithm. The polynomiality of the latter algorithm, is obtained by consideration of symmetry properties…

General Mathematics · Mathematics 2007-05-23 Aleksandr Golubchik
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