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Hyperbolic embeddings offer excellent quality with few dimensions when embedding hierarchical data structures like synonym or type hierarchies. Given a tree, we give a combinatorial construction that embeds the tree in hyperbolic space with…

Machine Learning · Computer Science 2018-04-25 Christopher De Sa , Albert Gu , Christopher Ré , Frederic Sala

Network embedding is a fervid topic in current networks science and observes that most real complex systems can be embedded in hidden metrics space and emerge as the geometrical property, where the geometric distance between nodes…

Physics and Society · Physics 2020-04-28 Zongning Wu , Zengru Di , Ying Fan

A key technique of machine learning and computer vision is to embed discrete weighted graphs into continuous spaces for further downstream processing. Embedding discrete hierarchical structures in hyperbolic geometry has proven very…

Machine Learning · Computer Science 2023-08-17 Frank Nielsen , Ke Sun

Stochastic embeddings of finite metric spaces into graph-theoretic trees have proven to be a vital tool for constructing approximation algorithms in theoretical computer science. In the present work, we build out some of the basic theory of…

Functional Analysis · Mathematics 2025-03-11 Chris Gartland

Neural embeddings have been used with great success in Natural Language Processing (NLP). They provide compact representations that encapsulate word similarity and attain state-of-the-art performance in a range of linguistic tasks. The…

Machine Learning · Statistics 2018-09-20 Benjamin Paul Chamberlain , James Clough , Marc Peter Deisenroth

Many high-dimensional and large-volume data sets of practical relevance have hierarchical structures induced by trees, graphs or time series. Such data sets are hard to process in Euclidean spaces and one often seeks low-dimensional…

Machine Learning · Computer Science 2021-09-16 Eli Chien , Chao Pan , Puoya Tabaghi , Olgica Milenkovic

We study relations between maps between relatively hyperbolic groups/spaces and quasisymmetric embeddings between their boundaries. More specifically, we establish a correspondence between (not necessarily coarsely surjective)…

Geometric Topology · Mathematics 2025-05-14 John M. Mackay , Alessandro Sisto

Embedding complex objects as vectors in low dimensional spaces is a longstanding problem in machine learning. We propose in this work an extension of that approach, which consists in embedding objects as elliptical probability…

Machine Learning · Statistics 2019-02-19 Boris Muzellec , Marco Cuturi

Hyperbolic space is increasingly used for hierarchical, tree-like, and network-structured data, but likelihood-based density modeling on hyperbolic space remains relatively limited. This paper develops finite mixture modeling with isotropic…

Methodology · Statistics 2026-04-29 Kisung You

The Gromov-Hausdorff distance provides a metric on the set of isometry classes of compact metric spaces. Unfortunately, computing this metric directly is believed to be computationally intractable. Motivated by applications in shape…

Geometric Topology · Mathematics 2016-10-20 Soledad Villar , Afonso S. Bandeira , Andrew J. Blumberg , Rachel Ward

Probabilistic Latent Variable Models (LVMs) excel at modeling complex, high-dimensional data through lower-dimensional representations. Recent advances show that equipping these latent representations with a Riemannian metric unlocks…

Machine Learning · Computer Science 2025-05-20 Luis Augenstein , Noémie Jaquier , Tamim Asfour , Leonel Rozo

Many real-world networks exhibit hierarchical, tree-like structure and heavy-tailed degree distributions, phenomena not readily captured by standard statistical models for network data. Extensions of the popular continuous latent space…

Methodology · Statistics 2026-05-13 Yiwei Gong , Anna L. Smith , Dena Asta , Catherine A. Calder

The Wasserstein distance received a lot of attention recently in the community of machine learning, especially for its principled way of comparing distributions. It has found numerous applications in several hard problems, such as domain…

Machine Learning · Statistics 2017-10-23 Nicolas Courty , Rémi Flamary , Mélanie Ducoffe

The development of data-dependent heuristics and representations for biological sequences that reflect their evolutionary distance is critical for large-scale biological research. However, popular machine learning approaches, based on…

Quantitative Methods · Quantitative Biology 2021-10-13 Gabriele Corso , Rex Ying , Michal Pándy , Petar Veličković , Jure Leskovec , Pietro Liò

Hyperbolic spaces, which have the capacity to embed tree structures without distortion owing to their exponential volume growth, have recently been applied to machine learning to better capture the hierarchical nature of data. In this…

Machine Learning · Computer Science 2021-03-18 Ryohei Shimizu , Yusuke Mukuta , Tatsuya Harada

Metric embeddings are a widely used method in algorithm design, where generally a ``complex'' metric is embedded into a simpler, lower-dimensional one. Historically, the theoretical computer science community has focused on bi-Lipschitz…

Data Structures and Algorithms · Computer Science 2025-05-19 Ainesh Bakshi , Vincent Cohen-Addad , Samuel B. Hopkins , Rajesh Jayaram , Silvio Lattanzi

Graph-structured data are widespread in real-world applications, such as social networks, recommender systems, knowledge graphs, chemical molecules etc. Despite the success of Euclidean space for graph-related learning tasks, its ability to…

Machine Learning · Computer Science 2022-11-09 Min Zhou , Menglin Yang , Lujia Pan , Irwin King

Hyperbolic ordinal embedding (HOE) represents entities as points in hyperbolic space so that they agree as well as possible with given constraints in the form of entity i is more similar to entity j than to entity k. It has been…

Machine Learning · Computer Science 2021-05-24 Atsushi Suzuki , Atsushi Nitanda , Jing Wang , Linchuan Xu , Marc Cavazza , Kenji Yamanishi

Bayesian inference for phylogenetics is a gold standard for computing distributions of phylogenies. It faces the challenging problem of. moving throughout the high-dimensional space of trees. However, hyperbolic space offers a low…

Populations and Evolution · Quantitative Biology 2023-07-19 Matthew Macaulay , Aaron E. Darling , Mathieu Fourment

Clustering is a fundamental unsupervised learning task for uncovering patterns in data. While Gaussian Blurring Mean Shift (GBMS) has proven effective for identifying arbitrarily shaped clusters in Euclidean space, it struggles with…

Machine Learning · Computer Science 2025-12-15 Arghya Pratihar , Arnab Seal , Swagatam Das , Inesh Chattopadhyay