English
Related papers

Related papers: Reduction of a model for sodium exchanges in kidne…

200 papers

The Poisson-Nernst-Planck (PNP) system is a standard model for describing ion transport. In many applications, e.g., ions in biological tissues, the presence of thin boundary layers poses both modelling and computational challenges. In a…

Biological Physics · Physics 2018-06-22 Zilong Song , Xiulei Cao , Huaxiong Huang

Hydrogen bond patterns, proton ordering, and phase transitions of monolayer ice in two-dimensional hydrophobic confinement are fundamentally different from those found for bulk ice. To investigate the behavior of quasi-2D ice, we perform…

Chemical Physics · Physics 2019-01-15 Shujuan Li , Burkhard Schmidt

Sodium-ion batteries are a cost-effective and sustainable alternative to lithium-ion systems for large-scale energy storage. Hard carbon (HC) anodes, composed of disordered graphitic and amorphous domains, offer high capacity but exhibit…

Epithelial cells regulate ion concentrations and volume through coordinated membrane pumps, ion channels, and paracellular pathways which can be modeled by classical single-compartment pump-leak equations (PLEs). Many epithelial functions,…

Cell Behavior · Quantitative Biology 2026-01-15 Kerry Tarrant , Alan R. Kay , Zahra Aminzare

The density of synaptic receptors in front of presynaptic release sites is stabilized in the presence of scaffold proteins, but the receptors and scaffold molecules have local exchanges with characteristic times shorter than that of the…

Biological Physics · Physics 2009-11-13 Ken Sekimoto , Antoine Triller

The inner mitochondrial membrane has been shown to have a novel structure that contains tubular components whose radii are on the order of 10 nm as well as comparatively flat regions. The structural organization of mitochondria is important…

Soft Condensed Matter · Physics 2009-11-10 A. Ponnuswamy , J. Nulton , J. M. Mahaffy , P. Salamon , T. G. Frey , A. R. C. Baljon

The maintenance of tissue and organ structures during dynamic homeostasis is often not well understood. In order for a system to be stable, cell renewal, cell migration and cell death must be finely balanced. Moreover, a tissue's shape must…

Tissues and Organs · Quantitative Biology 2022-05-11 Domenic P. J. Germano , Stuart T. Johnston , Edmund J. Crampin , James M. Osborne

We present a new method for modeling tissue perfusion on the capillary scale. The microvasculature is represented by a network of one-dimensional vessel segments embedded in the extra-vascular space. Vascular and extra-vascular space…

Computational Physics · Physics 2020-03-23 Timo Koch , Martin Schneider , Rainer Helmig , Patrick Jenny

An implicit Euler finite-volume scheme for a degenerate cross-diffusion system describing the ion transport through biological membranes is analyzed. The strongly coupled equations for the ion concentrations include drift terms involving…

Numerical Analysis · Mathematics 2018-01-30 Clément Cancès , Claire Chainais-Hillairet , Anita Gerstenmayer , Ansgar Jüngel

Positional ordering of a two-dimensional fluid of hard disks is examined in such narrow tubes where only the nearest-neighbor interactions take place. Using the exact transfer-matrix method the transverse and longitudinal pressure…

Statistical Mechanics · Physics 2015-05-30 S. Varga , G. Balló , P. Gurin

Despite the wide existence of vesicles in living cells as well as their important applications like drug-delivery, the underlying mechanism of vesicle fusion/fission remains under debate. Here, we develop a constrained self-consistent field…

Soft Condensed Matter · Physics 2023-05-22 Luofu Liu , Chao Duan , Rui Wang

We develop a microscopic theory of multipole interactions and orderings in 5$d^2$ transition metal ion compounds. In a cubic environment, the ground state of 5$d^2$ ions is a non-Kramers $E_g$ doublet, which is nonmagnetic but hosts…

Strongly Correlated Electrons · Physics 2021-08-25 Giniyat Khaliullin , Derek Churchill , P. Peter Stavropoulos , Hae-Young Kee

Interchange drive and cross-field transport of density filaments in quasi-neutral inhomogeneously magnetized electron-positron plasmas is shown to be strongly reduced by the presence of minority ions. Two mechanisms are identified for the…

Plasma Physics · Physics 2018-11-14 Alexander Kendl

It has been observed in fossil tracks and experiments in the layered silicate mica muscovite the transport of charge through the cation layers sandwiched between the layers of tetrahedra-octahedra-tetrahedra. A classical model for the…

Materials Science · Physics 2024-06-11 Juan F R Archilla , Jānis Bajārs , Yusuke Doi , Masayuki Kimura

Cellular uptake of nanoplastics is instrumental in their environmental accumulation and transfer to humans through the food chain. Despite extensive studies using spherical plastic nanoparticles, the influence of the morphological…

Soft Condensed Matter · Physics 2023-08-29 Xin Yong , Ke Du

The kidney exchange mechanism allows many patient-donor pairs who are otherwise incompatible with each other to come together and exchange kidneys along a cycle. However, due to infrastructure and legal constraints, kidney exchange can only…

Data Structures and Algorithms · Computer Science 2026-01-01 Aritra Banik , Sujoy Bhore , Palash Dey , Abhishek Sahu

Using a self-consistent atmosphere code, we construct a new model of the atmosphere of the transiting extrasolar giant planet HD 209458b to investigate the disparity between the observed strength of the sodium absorption feature at 589 nm…

Astrophysics · Physics 2009-11-07 J. J. Fortney , D. Sudarsky , I. Hubeny , C. S. Cooper , W. B. Hubbard , A. Burrows , J. I. Lunine

We revisit the theory of ion transport in parallel-plate channels and also discuss how the wettability of a solid and the mobility of adsorbed surface charges impact the transport of ions. It is shown that depending on the ratio of the…

Soft Condensed Matter · Physics 2021-09-29 Olga I. Vinogradova , Elena F. Silkina , Evgeny S. Asmolov

The derivation of suitable analytical models is an important step for the design and analysis of molecular communication systems. However, many existing models have limited applicability in practical scenarios due to various simplifications…

Emerging Technologies · Computer Science 2019-11-28 Maximilian Schäfer , Wayan Wicke , Werner Haselmayr , Rudolf Rabenstein , Robert Schober

It has been suggested that microtubules and other cytoskeletal filaments may act as electrical transmission lines. An electrical circuit model of the microtubule is constructed incorporating features of its cylindrical structure with…

Subcellular Processes · Quantitative Biology 2010-06-28 Holly Freedman , Vahid Rezania , Avner Priel , Eric Carpenter , Sergei Y. Noskovd , Jack A. Tuszynski