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A fast, efficient and comprehensive monitoring system is a vital part of any HEP experiment. This paper describes the software framework that will be used during ATLAS data taking to monitor the state of the data acquisition and the quality…

To satisfy the principles of FAIR software, software sustainability and software citation, research software must be formally published. Publication repositories make this possible and provide published software versions with unique and…

Software Engineering · Computer Science 2022-01-25 Stephan Druskat , Oliver Bertuch , Guido Juckeland , Oliver Knodel , Tobias Schlauch

Research software is an important output of research and must be published according to the FAIR Principles for Research Software. This can be achieved by publishing software with metadata under a persistent identifier. HERMES is a tool…

Software Engineering · Computer Science 2025-03-12 Sophie Kernchen , Michael Meinel , Stephan Druskat , Michael Fritzsche , David Pape , Oliver Bertuch

The combination of LLM agents with external tools enables models to solve complex tasks beyond their knowledge base. Human-designed tools are inflexible and restricted to solutions within the scope of pre-existing tools created by experts.…

Artificial Intelligence · Computer Science 2025-11-18 Mohd Ariful Haque , Justin Williams , Sunzida Siddique , Md. Hujaifa Islam , Hasmot Ali , Kishor Datta Gupta , Roy George

The ATLAS experiment at CERN relies on a worldwide distributed computing Grid infrastructure to support its physics program at the Large Hadron Collider. ATLAS has integrated cloud computing resources to complement its Grid infrastructure…

The Virtual Research Environment is an analysis platform developed at CERN serving the needs of scientific communities involved in European Projects. Its scope is to facilitate the development of end-to-end physics workflows, providing…

Analyzing non-compilable C/C++ submodules without a resolved build environment remains a critical bottleneck for industrial software evolution. Traditional static analysis tools often fail in these scenarios due to their reliance on…

Software Engineering · Computer Science 2026-02-20 Jaid Monwar Chowdhury , Ahmad Farhan Shahriar Chowdhury , Humayra Binte Monwar , Mahmuda Naznin

Recent advances in agentic AI have enabled increasingly autonomous workflows, but existing systems still face substantial challenges in achieving reliable deployment in real-world scientific research. In this work, we present a safe,…

Artificial Intelligence · Computer Science 2026-04-16 Qibin Liu , Julia Gonski

Digital computational outputs are now ubiquitous in the research workflow and the way in which these data are stored and cataloged is becoming more standardized across fields of research. However, even with accessible data and code, the…

Digital Libraries · Computer Science 2025-08-19 Sabar Dasgupta , Paul Nuyujukian

We report here on the workflow that we needed to develop in order to integrate the growing range of openly licensed, born-digital and, increasingly, machine actionable publications. Our developmental work focused upon textual data for…

The Hybrid Technology Hub and many other research centers work in cross-functional teams whose workflow is not necessarily linear and where in many cases technology advances are done through parallel work. The lack of proper tools and…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-02-18 Pavel Vazquez , Kayoko Shoji , Steffen Novik , Stefan Krauss , Simon Rayner

Purpose: This paper introduces the concept of "Agentic Publication," a novel LLM-driven framework designed to complement traditional scientific publishing by transforming papers into interactive knowledge systems that address challenges…

Artificial Intelligence · Computer Science 2026-05-06 Roberto Pugliese , George Kourousias , Francesco Venier , Grazia Garlatti Costa

ATLAS is a constraint-guided generation framework for structured engineering artifacts whose outputs must satisfy explicit schemas, domain rules, and audit requirements. Rather than treating a large language model as a standalone generator,…

Software Engineering · Computer Science 2026-04-07 Tong Ma , Hui Lai , Hui Wang , Zhenhu Tian , Chaochao Li , Fengjie Xu , Ling Fang

As Large Language Models (LLMs) become ubiquitous across various scientific domains, their lack of ability to perform complex tasks like running simulations or to make complex decisions limits their utility. LLM-based agents bridge this gap…

Computation and Language · Computer Science 2026-01-21 Anurag Acharya , Timothy Vega , Rizwan A. Ashraf , Anshu Sharma , Derek Parker , Robert Rallo

Progress in science is deeply bound to the effective use of high-performance computing infrastructures and to the efficient extraction of knowledge from vast amounts of data. Such data comes from different sources that follow a cycle…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-15 Rosa M Badia , Jorge Ejarque , Francesc Lordan , Daniele Lezzi , Javier Conejero , Javier Álvarez Cid-Fuentes , Yolanda Becerra , Anna Queralt

Input data for applications that run in cloud computing centres can be stored at distant repositories, often with multiple copies of the popular data stored at many sites. Locating and retrieving the remote data can be challenging, and we…

Recent autonomous research systems -- AI-Scientist, PaperOrchestra, AutoSOTA, DeepResearch, InternAgent, ResearchAgent and others -- show LLM agents can ideate, run experiments and write papers, but each fixes a particular control-flow…

Software Engineering · Computer Science 2026-05-08 Yuchen Wang , Zhongzhi Luan

This document is one of the deliverable reports created for the ESCAPE project. ESCAPE stands for Energy-efficient Scalable Algorithms for Weather Prediction at Exascale. The project develops world-class, extreme-scale computing…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-08-21 Willem Deconinck

The rapid advancement of Large Language Models (LLMs) has led to performance saturation on many established benchmarks, questioning their ability to distinguish frontier models. Concurrently, existing high-difficulty benchmarks often suffer…

Agentic systems, in which diverse agents cooperate to tackle challenging problems, are exploding in popularity in the AI community. However, existing agentic frameworks take a relatively narrow view of agents, apply a centralized model, and…

Multiagent Systems · Computer Science 2026-01-30 Alok Kamatar , J. Gregory Pauloski , Yadu Babuji , Ryan Chard , Mansi Sakarvadia , Daniel Babnigg , Kyle Chard , Ian Foster
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