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The growing use of neuroimaging technologies generates a massive amount of biomedical data that exhibit high dimensionality. Tensor-based analysis of brain imaging data has been proved quite effective in exploiting their multiway nature.…

Numerical Analysis · Computer Science 2016-07-21 Christos Chatzichristos , Eleftherios Kofidis , Giannis Kopsinis , Sergios Theodoridis

A key feature of many developmental systems is their ability to self-organize spatial patterns of functionally distinct cell fates. To ensure proper biological function, such patterns must be established reproducibly, by controlling and…

Biological Physics · Physics 2023-12-20 David B. Brückner , Gašper Tkačik

Spectral Photon-Counting Computed Tomography (SPCCT) is a promising technology that has shown a number of advantages over conventional X-ray Computed Tomography (CT) in the form of material separation, artefact removal and enhanced image…

Image and Video Processing · Electrical Eng. & Systems 2020-03-10 Dimitris Kamilis , Mario Blatter , Nick Polydorides

High-dimensional tensors or multi-way data are becoming prevalent in areas such as biomedical imaging, chemometrics, networking and bibliometrics. Traditional approaches to finding lower dimensional representations of tensor data include…

Machine Learning · Statistics 2012-02-14 Genevera I. Allen

Physics-informed neural networks (PINNs) are demonstrating remarkable promise in integrating physical models with gappy and noisy observational data, but they still struggle in cases where the target functions to be approximated exhibit…

Machine Learning · Computer Science 2021-06-16 Sifan Wang , Hanwen Wang , Paris Perdikaris

The overdetermination of the mathematical problem underlying ptychography is reduced by a host of experimentally more desirable settings. Furthermore, reconstruction of the sample-induced phase shift is typically limited by uncertainty in…

Signal Processing · Electrical Eng. & Systems 2023-07-19 Marcel Schloz , Thomas C. Pekin , Zhen Chen , Wouter Van den Broek , David A. Muller , Christoph T. Koch

Many supervised machine learning frameworks have been proposed for disease classification using functional magnetic resonance imaging (fMRI) data, producing important biomarkers. More recently, data pooling has flourished, making the result…

Quantitative Methods · Quantitative Biology 2022-02-24 Dushyant Sahoo , Mathilde Antoniades , Cynthia H. Y. Fu , Christos Davatzikos

Two-phase random textures abound in a host of contexts, porous and composite media, ecological structures, biological media and astrophysical structures. Questions surrounding the spatial structure of such textures continue to pose many…

Materials Science · Physics 2012-01-04 Yang Jiao , Sal Torquato , Frank H. Stillinger

We show that the numerical strong disorder renormalization group algorithm (SDRG) of Hikihara et. al. [Phys. Rev. B 60, 12116 (1999)] for the one-dimensional disordered Heisenberg model naturally describes a tree tensor network (TTN) with…

Disordered Systems and Neural Networks · Physics 2014-07-01 Andrew M. Goldsborough , Rudolf A. Römer

Physics-informed neural networks (PINNs) are a new tool for solving boundary value problems by defining loss functions of neural networks based on governing equations, boundary conditions, and initial conditions. Recent investigations have…

Computational Engineering, Finance, and Science · Computer Science 2023-11-14 Ali Harandi , Ahmad Moeineddin , Michael Kaliske , Stefanie Reese , Shahed Rezaei

We propose methods to train convolutional neural networks (CNNs) with both binarized weights and activations, leading to quantized models that are specifically friendly to mobile devices with limited power capacity and computation…

Computer Vision and Pattern Recognition · Computer Science 2022-06-07 Bohan Zhuang , Chunhua Shen , Mingkui Tan , Peng Chen , Lingqiao Liu , Ian Reid

We propose a flexible and multi-scale method for organizing, visualizing, and understanding datasets sampled from or near stratified spaces. The first part of the algorithm produces a cover tree using adaptive thresholds based on a…

Computational Geometry · Computer Science 2016-03-01 Paul Bendich , Ellen Gasparovic , Christopher J. Tralie , John Harer

Convolutional neural networks (CNNs) are a standard tool for computer vision tasks such as image classification. However, typical model architectures may result in the loss of topological information. In specific domains such as…

Image and Video Processing · Electrical Eng. & Systems 2026-03-05 Shrunal Pothagoni , Benjamin Schweinhart

This work describes the investigation of neuromorphic computing-based spiking neural network (SNN) models used to filter data from sensor electronics in high energy physics experiments conducted at the High Luminosity Large Hadron Collider.…

We introduce a novel variant of GNN for particle tracking called Hierarchical Graph Neural Network (HGNN). The architecture creates a set of higher-level representations which correspond to tracks and assigns spacepoints to these tracks,…

High Energy Physics - Experiment · Physics 2023-03-06 Ryan Liu , Paolo Calafiura , Steven Farrell , Xiangyang Ju , Daniel Thomas Murnane , Tuan Minh Pham

We consider a set of probabilistic functions of some input variables as a representation of the inputs. We present bounds on how informative a representation is about input data. We extend these bounds to hierarchical representations so…

Machine Learning · Statistics 2015-02-03 Greg Ver Steeg , Aram Galstyan

This paper presents a novel framework for reconstructing multi-hop explanations in science Question Answering (QA). While existing approaches for multi-hop reasoning build explanations considering each question in isolation, we propose a…

Artificial Intelligence · Computer Science 2021-02-11 Marco Valentino , Mokanarangan Thayaparan , André Freitas

How to extract useful insights from data is always a challenge, especially if the data is multidimensional. Often, the data can be organized according to certain hierarchical structure that are stemmed either from data collection process or…

Applications · Statistics 2016-04-21 Kun Yang , Wing Hung Wong

Disordered molecular systems such as amorphous catalysts, organic thin films, electrolyte solutions, and water are at the cutting edge of computational exploration today. Traditional simulations of such systems at length-scales relevant to…

Mesoscale and Nanoscale Physics · Physics 2023-09-06 Ata Madanchi , Michael Kilgour , Frederik Zysk , Thomas D. Kühne , Lena Simine

We tackle the problem of generalization to unseen configurations for dynamic tasks in the real world while learning from high-dimensional image input. The family of nonlinear dynamical system-based methods have successfully demonstrated…

Machine Learning · Computer Science 2021-07-13 Shikhar Bahl , Abhinav Gupta , Deepak Pathak
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