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Graph neural networks (GNNs) have emerged as powerful tools for learning protein structures by capturing spatial relationships at the residue level. However, existing GNN-based methods often face challenges in learning multiscale…

Machine Learning · Computer Science 2026-02-03 Shih-Hsin Wang , Yuhao Huang , Taos Transue , Justin Baker , Jonathan Forstater , Thomas Strohmer , Bao Wang

How to properly model graphs is a long-existing and important problem in NLP area, where several popular types of graphs are knowledge graphs, semantic graphs and dependency graphs. Comparing with other data structures, such as sequences…

Computation and Language · Computer Science 2019-07-16 Linfeng Song

As a crucial step in extractive document summarization, learning cross-sentence relations has been explored by a plethora of approaches. An intuitive way is to put them in the graph-based neural network, which has a more complex structure…

Computation and Language · Computer Science 2020-04-28 Danqing Wang , Pengfei Liu , Yining Zheng , Xipeng Qiu , Xuanjing Huang

Graph Neural Networks (GNNs) have demonstrated significant success in learning from graph-structured data but often struggle on heterophilous graphs, where connected nodes differ in features or class labels. This limitation arises from…

Machine Learning · Computer Science 2025-09-30 Zhongtian Sun , Anoushka Harit , Alexandra Cristea , Christl A. Donnelly , Pietro Liò

Graph representation learning has rapidly emerged as a pivotal field of study. Despite its growing popularity, the majority of research has been confined to embedding single-layer graphs, which fall short in representing complex systems…

Machine Learning · Computer Science 2024-03-29 Marco Bongiovanni , Luca Gallo , Roberto Grasso , Alfredo Pulvirenti

Retrieval-augmented generation (RAG) has demonstrated its ability to enhance Large Language Models (LLMs) by integrating external knowledge sources. However, multi-hop questions, which require the identification of multiple knowledge…

Machine Learning · Computer Science 2026-04-28 Yuchen Yan , Peiyan Zhang , Zhihua Liu , Hao Wang , Yatao Bian , Weiming Li , Xiaoshuai Hao

Graph representation learning for hypergraphs can be used to extract patterns among higher-order interactions that are critically important in many real world problems. Current approaches designed for hypergraphs, however, are unable to…

Machine Learning · Computer Science 2019-11-11 Ruochi Zhang , Yuesong Zou , Jian Ma

Self-supervised representation learning on text-attributed graphs, which aims to create expressive and generalizable representations for various downstream tasks, has received increasing research attention lately. However, existing methods…

Computation and Language · Computer Science 2023-10-24 Yichuan Li , Kaize Ding , Kyumin Lee

Document layout analysis has a wide range of requirements across various domains, languages, and business scenarios. However, most current state-of-the-art algorithms are language-dependent, with architectures that rely on transformer…

Computer Vision and Pattern Recognition · Computer Science 2023-04-25 Shu Wei , Nuo Xu

Machine comprehension is a representative task of natural language understanding. Typically, we are given context paragraph and the objective is to answer a question that depends on the context. Such a problem requires to model the complex…

Computation and Language · Computer Science 2018-03-28 Zia Hasan , Sebastian Fischer

Answering multiple-choice questions in a setting in which no supporting documents are explicitly provided continues to stand as a core problem in natural language processing. The contribution of this article is two-fold. First, it describes…

Computation and Language · Computer Science 2019-11-15 George-Sebastian Pîrtoacă , Traian Rebedea , Stefan Ruseti

Recursive neural networks (RvNN) have been shown useful for learning sentence representations and helped achieve competitive performance on several natural language inference tasks. However, recent RvNN-based models fail to learn simple…

Computation and Language · Computer Science 2021-04-13 Atul Sahay , Ayush Maheshwari , Ritesh Kumar , Ganesh Ramakrishnan , Manjesh Kumar Hanawal , Kavi Arya

Paraphrase detection is an important task in text analytics with numerous applications such as plagiarism detection, duplicate question identification, and enhanced customer support helpdesks. Deep models have been proposed for representing…

Computation and Language · Computer Science 2020-01-16 Muhammad Haroon Shakeel , Asim Karim , Imdadullah Khan

Large language models (LLMs) are widely used, but they often generate subtle factual errors, especially in long-form text. These errors are fatal in some specialized domains such as medicine. Existing fact-checking with grounding documents…

Computation and Language · Computer Science 2025-05-29 Yingjian Chen , Haoran Liu , Yinhong Liu , Jinxiang Xie , Rui Yang , Han Yuan , Yanran Fu , Peng Yuan Zhou , Qingyu Chen , James Caverlee , Irene Li

Retrieval-augmented generation (RAG) systems have been widely adopted in contemporary large language models (LLMs) due to their ability to improve generation quality while reducing the required input context length. In this work, we focus…

Computation and Language · Computer Science 2026-04-07 Tianyi Zhang , Andreas Marfurt

Natural question generation (QG) aims to generate questions from a passage and an answer. Previous works on QG either (i) ignore the rich structure information hidden in text, (ii) solely rely on cross-entropy loss that leads to issues like…

Computation and Language · Computer Science 2020-08-28 Yu Chen , Lingfei Wu , Mohammed J. Zaki

Machine Learning has been the quintessential solution for many AI problems, but learning is still heavily dependent on the specific training data. Some learning models can be incorporated with a prior knowledge in the Bayesian set up, but…

Computation and Language · Computer Science 2018-05-22 K M Annervaz , Somnath Basu Roy Chowdhury , Ambedkar Dukkipati

Graph Neural Networks (GNNs) have been highly successful for the node classification task. GNNs typically assume graphs are homophilic, i.e. neighboring nodes are likely to belong to the same class. However, a number of real-world graphs…

Machine Learning · Computer Science 2024-09-20 Yurui Lai , Taiyan Zhang , Rui Fan

Recent graph neural networks (GNNs) with the attention mechanism have historically been limited to small-scale homogeneous graphs (HoGs). However, GNNs handling heterogeneous graphs (HeGs), which contain several entity and relation types,…

Machine Learning · Computer Science 2023-04-25 Roshni G. Iyer , Wei Wang , Yizhou Sun

To provide a survey on the existing tasks and models in Machine Reading Comprehension (MRC), this report reviews: 1) the dataset collection and performance evaluation of some representative simple-reasoning and complex-reasoning MRC tasks;…

Computation and Language · Computer Science 2020-01-24 Chao Wang