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Suffix tree (and the closely related suffix array) are fundamental structures capturing all substrings of a given text essentially by storing all its suffixes in the lexicographical order. In some applications, we work with a subset of $b$…

Data Structures and Algorithms · Computer Science 2016-08-03 Paweł Gawrychowski , Tomasz Kociumaka

Re-Pair is a grammar compression scheme with favorably good compression rates. The computation of Re-Pair comes with the cost of maintaining large frequency tables, which makes it hard to compute Re-Pair on large scale data sets. As a…

Data Structures and Algorithms · Computer Science 2019-11-19 Dominik Köppl , Tomohiro I , Isamu Furuya , Yoshimasa Takabatake , Kensuke Sakai , Keisuke Goto

In this paper, we present a new data structure called the packed compact trie (packed c-trie) which stores a set $S$ of $k$ strings of total length $n$ in $n \log\sigma + O(k \log n)$ bits of space and supports fast pattern matching queries…

Data Structures and Algorithms · Computer Science 2017-10-11 Takuya Takagi , Shunsuke Inenaga , Kunihiko Sadakane , Hiroki Arimura

A new line of work, started with Dwork et al., studies the task of answering statistical queries using a sample and relates the problem to the concept of differential privacy. By the Hoeffding bound, a sample of size $O(\log k/\alpha^2)$…

Machine Learning · Computer Science 2015-11-11 Kobbi Nissim , Uri Stemmer

In a \emph{weighted sequence}, for every position of the sequence and every letter of the alphabet a probability of occurrence of this letter at this position is specified. Weighted sequences are commonly used to represent imprecise or…

Data Structures and Algorithms · Computer Science 2017-08-28 Carl Barton , Tomasz Kociumaka , Chang Liu , Solon P. Pissis , Jakub Radoszewski

In this report we present an algorithm solving Triangle Counting in time $O(d^2n+m)$, where n and m, respectively, denote the number of vertices and edges of a graph G and d denotes its twin-width, a recently introduced graph parameter. We…

Data Structures and Algorithms · Computer Science 2022-02-15 Stefan Kratsch , Florian Nelles , Alexandre Simon

Given a set of n disjoint balls b1, . . ., bn in IRd, we provide a data structure, of near linear size, that can answer (1 \pm \epsilon)-approximate kth-nearest neighbor queries in O(log n + 1/\epsilon^d) time, where k and \epsilon are…

Computational Geometry · Computer Science 2014-10-30 Sariel Har-Peled , Nirman Kumar

Re-Pair is an effective grammar-based compression scheme achieving strong compression rates in practice. Let $n$, $\sigma$, and $d$ be the text length, alphabet size, and dictionary size of the final grammar, respectively. In their original…

Data Structures and Algorithms · Computer Science 2016-11-07 Philip Bille , Inge Li Gørtz , Nicola Prezza

Geometric data structures have been extensively studied in the regime where the dimension is much smaller than the number of input points. But in many scenarios in Machine Learning, the dimension can be much higher than the number of points…

Data Structures and Algorithms · Computer Science 2025-04-07 Martin G. Herold , Danupon Nanongkai , Joachim Spoerhase , Nithin Varma , Zihang Wu

Problems on repeated geometric patterns in finite point sets in Euclidean space are extensively studied in the literature of combinatorial and computational geometry. Such problems trace their inspiration to Erd\H{o}s' original work on that…

Computational Geometry · Computer Science 2022-01-03 Aya Bernstine , Yehonatan Mizrahi

More than 25 years ago Chazelle~\emph{et al.} (FOCS 1991) studied the following question: Is it possible to cut any set of $n$ lines in ${\Bbb R}^3$ into a subquadratic number of fragments such that the resulting fragments admit a depth…

Computational Geometry · Computer Science 2017-04-07 Mark de Berg

Given an undirected unweighted graph $G$ and a source set $S$ of $|S| = \sigma $ sources, we want to build a data structure which can process the following query {\sc Q}$(s,t,e):$ find the shortest distance from $s$ to $t$ avoiding an edge…

Data Structures and Algorithms · Computer Science 2018-05-02 Manoj Gupta , Aditi Singh

We introduce the first grammar-compressed representation of a sequence that supports searches in time that depends only logarithmically on the size of the grammar. Given a text $T[1..u]$ that is represented by a (context-free) grammar of…

Data Structures and Algorithms · Computer Science 2011-10-21 Francisco Claude , Gonzalo Navarro

The discrepancy between two independent samples \(X_1,\dots,X_n\) and \(Y_1,\dots,Y_n\) drawn from the same distribution on $\mathbb{R}^d$ typically has order \(O(\sqrt{n})\) even in one dimension. We give a simple online algorithm that…

Probability · Mathematics 2026-01-23 Gleb Smirnov , Roman Vershynin

Can we analyze data without decompressing it? As our data keeps growing, understanding the time complexity of problems on compressed inputs, rather than in convenient uncompressed forms, becomes more and more relevant. Suppose we are given…

Computational Complexity · Computer Science 2018-03-05 Amir Abboud , Arturs Backurs , Karl Bringmann , Marvin Künnemann

We present a deterministic algorithm for solving a wide range of dynamic programming problems in trees in $O(\log D)$ rounds in the massively parallel computation model (MPC), with $O(n^\delta)$ words of local memory per machine, for any…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-08 Chetan Gupta , Rustam Latypov , Yannic Maus , Shreyas Pai , Simo Särkkä , Jan Studený , Jukka Suomela , Jara Uitto , Hossein Vahidi

We revisit the problem of longest common property preserving substring queries introduced by~Ayad et al. (SPIRE 2018, arXiv 2018). We consider a generalized and unified on-line setting, where we are given a set $X$ of $k$ strings of total…

Data Structures and Algorithms · Computer Science 2019-06-14 Kazuki Kai , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda , Tomasz Kociumaka

Let $A$ be a static array storing $n$ elements from a totally ordered set. We present a data structure of optimal size at most $n\log_2(3+2\sqrt{2})+o(n)$ bits that allows us to answer the following queries on $A$ in constant time, without…

Data Structures and Algorithms · Computer Science 2011-02-03 Johannes Fischer

In the longest common substring (LCS) problem, we are given two strings $S$ and $T$, each of length at most $n$, and we are asked to find a longest string occurring as a fragment of both $S$ and $T$. This is a classical and well-studied…

Data Structures and Algorithms · Computer Science 2018-07-17 Amihood Amir , Panagiotis Charalampopoulos , Solon P. Pissis , Jakub Radoszewski

Suppose we are asked to preprocess a string \(s [1..n]\) such that later, given a substring's endpoints, we can quickly count how many distinct characters it contains. In this paper we give a data structure for this problem that takes \(n…

Data Structures and Algorithms · Computer Science 2010-11-16 Travis Gagie , Juha Kärkkäinen
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