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Chirality plays an important role in physics, chemistry, biology, and other fields. It describes an essential symmetry in structure. However, chirality invariants are usually complicated in expression or difficult to evaluate. In this…

Computational Physics · Physics 2017-12-22 He Zhang , Hanlin Mo , You Hao , Shirui Li , Hua Li

We list more than 200 new examples of minor minimal intrinsically knotted graphs and describe many more that are intrinsically knotted and likely minor minimal.

Geometric Topology · Mathematics 2015-03-13 Noam Goldberg , Thomas W. Mattman , Ramin Naimi

Although the phenomenon of chirality appears in many investigations of maps and hypermaps no detailed study of chirality seems to have been carried out. Chirality of maps and hypermaps is not merely a binary invariant but can be quantified…

Combinatorics · Mathematics 2007-05-23 Antonio Breda d'Azevedo , Gareth Jones , Roman Nedela , Martin Skoviera

We identify all minimal chordal graphs that are not circular-arc graphs, thereby resolving one of ``the main open problems'' concerning the structures of circular-arc graphs as posed by Dur{\'{a}}n, Grippo, and Safe in 2011. The problem had…

Combinatorics · Mathematics 2025-02-25 Yixin Cao , Tomasz Krawczyk

Finding the common structural features of two molecules is a fundamental task in cheminformatics. Most drugs are small molecules, which can naturally be interpreted as graphs. Hence, the task is formalized as maximum common subgraph…

Data Structures and Algorithms · Computer Science 2016-10-28 Andre Droschinsky , Nils Kriege , Petra Mutzel

A quadrangular embedding of a graph in a surface $\Sigma$, also known as a quadrangulation of $\Sigma$, is a cellular embedding in which every face is bounded by a $4$-cycle. A quadrangulation of $\Sigma$ is minimal if there is no…

Combinatorics · Mathematics 2021-06-28 Wenzhong Liu , M. N. Ellingham , Dong Ye

Suppose a graph has no large balanced bicliques, but has large minimum degree. Then what can we say about its induced subgraphs? This question motivates the study of degree-boundedness, which is like $\chi$-boundedness but for minimum…

Combinatorics · Mathematics 2024-11-14 Xiying Du , Rose McCarty

A graph is $k$-chordal if it does not have an induced cycle with length greater than $k$. We call a graph chordal if it is $3$-chordal. Let $G$ be a graph. The distance between the vertices $x$ and $y$, denoted by $d_{G}(x,y)$, is the…

Combinatorics · Mathematics 2022-10-04 James M Shook , Bing Wei

A connected nontrivial graph $G$ is {\it matching covered} if every edge of $G$ is contained in some perfect matching of $G$. A matching covered graph $G$ is {\it minimal} if $G-e$ is not matching covered for each edge $e$ of $G$. A graph…

Combinatorics · Mathematics 2025-12-01 Liwen Lian , Jinfeng Liu , Mengyuan Niu , Xiumei Wang

A consistent path system in a graph $G$ is an intersection-closed collection of paths, with exactly one path between any two vertices in $G$. We call $G$ metrizable if every consistent path system in it is the system of geodesic paths…

Combinatorics · Mathematics 2023-11-17 Maria Chudnovsky , Daniel Cizma , Nati Linial

Let $\mathbb{G}_{n,\gamma}$ be the set of simple and connected graphs on $n$ vertices and with domination number $\gamma$. The graph with minimum spectral radius among $\mathbb{G}_{n,\gamma}$ is called the minimizer graph. In this paper, we…

Combinatorics · Mathematics 2022-12-05 Chang Liu , Jianping Li

Chemical graphs are simple undirected connected graphs, where vertices represent atoms in a molecule and edges represent chemical bonds. A degree-based topological index is a molecular descriptor used to study specific physicochemical…

A coloring of edges of a graph $G$ is injective if for any two distinct edges $e_1$ and $e_2$, the colors of $e_1$ and $e_2$ are distinct if they are at distance $1$ in $G$ or in a common triangle. Naturally, the injective chromatic index…

Combinatorics · Mathematics 2021-04-26 Alexandr Kostochka , André Raspaud , Jingwei Xu

A graph is chordal if every cycle of length at least four contains a chord, that is, an edge connecting two nonconsecutive vertices of the cycle. Several classical applications in sparse linear systems, database management, computer vision,…

Data Structures and Algorithms · Computer Science 2016-12-07 David Bergman , Carlos H. Cardonha , Andre A. Cire , Arvind U. Raghunathan

A graph G is weakly 4-connected if it is 3-connected, has at least five vertices, and for every pair of sets (A,B) with union V(G) and intersection of size three such that no edge has one end in A-B and the other in B-A, one of the induced…

Combinatorics · Mathematics 2014-01-14 Rajneesh Hegde , Robin Thomas

Photons with spin angular momentum possess intrinsic chirality which underpins many phenomena including nonlinear optics1, quantum optics2, topological photonics3 and chiroptics4. Intrinsic chirality is weak in natural materials, and recent…

Let $M$ be a left $R$-module. We define the \emph{homomorphism submodule graph} $\Gamma_{\mathrm{Hom}}(M)$ as the simple graph whose vertices are the proper submodules of $M$, with an edge between distinct vertices $N_1$ and $N_2$ if and…

Combinatorics · Mathematics 2025-11-12 Shahram Mehry , Mansour Molaeinejad

Molecules with identical graph connectivity can exhibit different physical and biological properties if they exhibit stereochemistry-a spatial structural characteristic. However, modern neural architectures designed for learning…

Quantitative Methods · Quantitative Biology 2020-12-07 Lagnajit Pattanaik , Octavian-Eugen Ganea , Ian Coley , Klavs F. Jensen , William H. Green , Connor W. Coley

The edges surrounding a face of a map $M$ form a cycle $C$, called the boundary cycle of the face, and $C$ is often not a simple cycle. If the map $M$ is arc-transitive, then there is a cyclic subgroup of automorphisms of $M$ which leaves…

Combinatorics · Mathematics 2021-11-05 Jiyong Chen , Cai Heng Li , Cheryl E. Praeger , Shu-Jiao Song

Let $G=(V,E)$ be a simple connected graph. A matching $M$ in a graph $G$ is a collection of edges of $G$ such that no two edges from $M$ share a vertex. A matching $M$ is maximal if it cannot be extended to a larger matching in $G$. The…

Combinatorics · Mathematics 2017-12-12 Saeid Alikhani , Neda Soltani