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Computer aided drug design is a promising approach to reduce the tremendous costs, i.e. time and resources, for developing new medicinal drugs. It finds application in aiding the traversal of the vast chemical space of potentially useful…

Neural and Evolutionary Computing · Computer Science 2024-05-02 Tomoya Hömberg , Sanaz Mostaghim , Satoru Hiwa , Tomoyuki Hiroyasu

The community structure of a complex network can be determined by finding the partitioning of its nodes that maximizes modularity. Many of the proposed algorithms for doing this work by recursively bisecting the network. We show that this…

Computers and Society · Computer Science 2015-05-13 Yudong Sun , Bogdan Danila , Kresimir Josic , Kevin E. Bassler

This paper proposes a new evolutionary algorithm, called DSMGA-II, to efficiently solve optimization problems via exploiting problem substructures. The proposed algorithm adopts pairwise linkage detection and stores the information in the…

Neural and Evolutionary Computing · Computer Science 2018-08-01 Shih-Huan Hsu , Tian-Li Yu

Networks are commonly used to model complex systems. The different entities in the system are represented by nodes of the network and their interactions by edges. In most real life systems, the different entities may interact in different…

Social and Information Networks · Computer Science 2024-01-17 Meiby Ortiz-Bouza , Selin Aviyente

A genetic algorithm (GA) is a search method that optimises a population of solutions by simulating natural evolution. Good solutions reproduce together to create better candidates. The standard GA assumes that any two solutions can mate.…

Neural and Evolutionary Computing · Computer Science 2021-04-12 Aymeric Vie

Evolutionary algorithms are widely used for solving multi-objective optimization problems. A prominent example is NSGA-III, which is particularly well suited for solving problems involving more than three objectives, distinguishing it from…

Neural and Evolutionary Computing · Computer Science 2025-11-11 Andre Opris

Community structure is an important property of complex networks. An automatic discovery of such structure is a fundamental task in many disciplines, including sociology, biology, engineering, and computer science. Recently, several…

Physics and Society · Physics 2008-04-11 Jianhua Ruan , Weixiong Zhang

This paper proposes a multiobjective multitasking optimization evolutionary algorithm based on decomposition with dual neighborhood. In our proposed algorithm, each subproblem not only maintains a neighborhood based on the Euclidean…

Computational Engineering, Finance, and Science · Computer Science 2021-01-20 Xianpeng Wang , Zhiming Dong , Lixin Tang , Qingfu Zhang

A lot of research effort has been put into community detection from all corners of academic interest such as physics, mathematics and computer science. In this paper I have proposed a Bi-Objective Genetic Algorithm for community detection…

Social and Information Networks · Computer Science 2011-09-19 Rohan Agrawal

One of the most widely used methods for community detection in networks is the maximization of the quality function known as modularity. Of the many maximization techniques that have been used in this context, some of the most conceptually…

Physics and Society · Physics 2015-11-24 Xiao Zhang , M. E. J. Newman

Population-based evolutionary algorithms have great potential to handle multiobjective optimisation problems. However, these algorithms depends largely on problem characteristics, and there is a need to improve their performance for a wider…

Neural and Evolutionary Computing · Computer Science 2019-10-17 Shouyong Jiang , Hongru Li , Jinglei Guo , Mingjun Zhong , Shengxiang Yang , Marcus Kaiser , Natalio Krasnogor

Community detection algorithms attempt to find the best clusters of nodes in an arbitrary complex network. Multi-scale ("multiresolution") community detection extends the problem to identify the best network scale(s) for these clusters. The…

Physics and Society · Physics 2015-06-11 Peter Ronhovde , Zohar Nussinov

Multi-omic datasets offer opportunities for improved biomarker discovery in cancer research, but their high dimensionality and limited sample sizes make identifying compact and effective biomarker panels challenging. Feature selection in…

Genomics · Quantitative Biology 2026-04-02 Luca Cattelani , Vittorio Fortino

The NSGA-II is the most prominent multi-objective evolutionary algorithm (cited more than 50,000 times). Very recently, a mathematical runtime analysis has proven that this algorithm can have enormous difficulties when the number of…

Neural and Evolutionary Computing · Computer Science 2024-11-18 Benjamin Doerr , Dimitri Korkotashvili , Martin S. Krejca

The multi-gradient descent algorithm (MGDA) finds a common descent direction that can improve all objectives by identifying the minimum-norm point in the convex hull of the objective gradients. This method has become a foundational tool in…

Optimization and Control · Mathematics 2025-04-16 Yuan-Zheng Lei , Yaobang Gong , Xianfeng Terry Yang

We propose a novel method to find the community structure in complex networks based on an extremal optimization of the value of modularity. The method outperforms the optimal modularity found by the existing algorithms in the literature. We…

Disordered Systems and Neural Networks · Physics 2009-11-11 J. Duch , A. Arenas

Nonlinear optical (NLO) materials are essential for many photonic, telecommunication, and laser technologies, yet discovering better NLO molecules is computationally challenging due to the vast chemical space and competing objectives. We…

Computational Physics · Physics 2026-05-05 Dominic Mashak , Jacob Schrum , S. A. Alexander

The selection of features is an essential data preprocessing stage in data mining. The core principle of feature selection seems to be to pick a subset of possible features by excluding features with almost no predictive information as well…

Machine Learning · Computer Science 2020-08-11 Mehrdad Rostami , Kamal Berahmand , Saman Forouzandeh

Community detection in a complex network is an important problem of much interest in recent years. In general, a community detection algorithm chooses an objective function and captures the communities of the network by optimizing the…

Social and Information Networks · Computer Science 2015-08-27 Suman Saha , Satya P. Ghrera

Purpose: Current inverse planning methods for IMRT are limited because they are not designed to explore the trade-offs between the competing objectives between the tumor and normal tissues. Our goal was to develop an efficient…

Medical Physics · Physics 2015-06-04 Clay Holdsworth , Minsun Kim , Jay Liao , Mark H Phillips