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Biomedical triple extraction systems aim to automatically extract biomedical entities and relations between entities. The exploration of applying large language models (LLM) to triple extraction is still relatively unexplored. In this work,…

Computation and Language · Computer Science 2024-04-30 Mingchen Li , Huixue Zhou , Rui Zhang

The goal of text ranking is to generate an ordered list of texts retrieved from a corpus in response to a query. Although the most common formulation of text ranking is search, instances of the task can also be found in many natural…

Information Retrieval · Computer Science 2021-08-20 Jimmy Lin , Rodrigo Nogueira , Andrew Yates

Transformer models have achieved great success across many NLP problems. However, previous studies in automated ICD coding concluded that these models fail to outperform some of the earlier solutions such as CNN-based models. In this paper…

Self-supervised bidirectional transformer models such as BERT have led to dramatic improvements in a wide variety of textual classification tasks. The modern digital world is increasingly multimodal, however, and textual information is…

Computation and Language · Computer Science 2020-11-13 Douwe Kiela , Suvrat Bhooshan , Hamed Firooz , Ethan Perez , Davide Testuggine

Multilingual pretrained language models have demonstrated remarkable zero-shot cross-lingual transfer capabilities. Such transfer emerges by fine-tuning on a task of interest in one language and evaluating on a distinct language, not seen…

Computation and Language · Computer Science 2021-01-28 Benjamin Muller , Yanai Elazar , Benoît Sagot , Djamé Seddah

Recently, BERT has become an essential ingredient of various NLP deep models due to its effectiveness and universal-usability. However, the online deployment of BERT is often blocked by its large-scale parameters and high computational…

Computation and Language · Computer Science 2020-04-08 Bowen Wu , Huan Zhang , Mengyuan Li , Zongsheng Wang , Qihang Feng , Junhong Huang , Baoxun Wang

This paper proposes a new principled multi-task representation learning framework (InfoMTL) to extract noise-invariant sufficient representations for all tasks. It ensures sufficiency of shared representations for all tasks and mitigates…

Computation and Language · Computer Science 2025-03-07 Dou Hu , Lingwei Wei , Wei Zhou , Songlin Hu

Large language models (LLMs) have demonstrated impressive capabilities across diverse languages. This study explores how LLMs handle multilingualism. Based on observed language ratio shifts among layers and the relationships between network…

Computation and Language · Computer Science 2024-11-12 Yiran Zhao , Wenxuan Zhang , Guizhen Chen , Kenji Kawaguchi , Lidong Bing

We apply a Transformer architecture, specifically BERT, to learn flexible and high quality molecular representations for drug discovery problems. We study the impact of using different combinations of self-supervised tasks for pre-training,…

Machine Learning · Computer Science 2020-11-30 Benedek Fabian , Thomas Edlich , Héléna Gaspar , Marwin Segler , Joshua Meyers , Marco Fiscato , Mohamed Ahmed

The introduction of the Transformer neural network, along with techniques like self-supervised pre-training and transfer learning, has paved the way for advanced models like BERT. Despite BERT's impressive performance, opportunities for…

Computation and Language · Computer Science 2024-07-02 Farnaz Zeidi , Mehmet Fatih Amasyali , Çiğdem Erol

It can be challenging to train multi-task neural networks that outperform or even match their single-task counterparts. To help address this, we propose using knowledge distillation where single-task models teach a multi-task model. We…

Computation and Language · Computer Science 2019-07-11 Kevin Clark , Minh-Thang Luong , Urvashi Khandelwal , Christopher D. Manning , Quoc V. Le

Deep learning (DL) techniques have been used to support several code-related tasks such as code summarization and bug-fixing. In particular, pre-trained transformer models are on the rise, also thanks to the excellent results they achieved…

Supervised models trained to predict properties from representations have been achieving high accuracy on a variety of tasks. For instance, the BERT family seems to work exceptionally well on the downstream task from NER tagging to the…

Computation and Language · Computer Science 2020-12-22 Tejas Vaidhya , Ayush Kaushal

In recent years, with the growing amount of biomedical documents, coupled with advancement in natural language processing algorithms, the research on biomedical named entity recognition (BioNER) has increased exponentially. However, BioNER…

Computation and Language · Computer Science 2020-09-22 Usman Naseem , Matloob Khushi , Vinay Reddy , Sakthivel Rajendran , Imran Razzak , Jinman Kim

Models based on BERT have been extremely successful in solving a variety of natural language processing (NLP) tasks. Unfortunately, many of these large models require a great deal of computational resources and/or time for pre-training and…

Computation and Language · Computer Science 2022-02-28 Sharath Nittur Sridhar , Anthony Sarah , Sairam Sundaresan

Text classification tasks which aim at harvesting and/or organizing information from electronic health records are pivotal to support clinical and translational research. However these present specific challenges compared to other…

Computation and Language · Computer Science 2020-05-15 Aurelie Mascio , Zeljko Kraljevic , Daniel Bean , Richard Dobson , Robert Stewart , Rebecca Bendayan , Angus Roberts

Transformer-based masked language models such as BERT, trained on general corpora, have shown impressive performance on downstream tasks. It has also been demonstrated that the downstream task performance of such models can be improved by…

Computation and Language · Computer Science 2023-05-04 Zhi Hong , Aswathy Ajith , Gregory Pauloski , Eamon Duede , Kyle Chard , Ian Foster

Pre-trained models for Natural Languages (NL) like BERT and GPT have been recently shown to transfer well to Programming Languages (PL) and largely benefit a broad set of code-related tasks. Despite their success, most current methods…

Computation and Language · Computer Science 2021-09-03 Yue Wang , Weishi Wang , Shafiq Joty , Steven C. H. Hoi

Recently, Language Models (LMs) instruction-tuned on multiple tasks, also known as multitask-prompted fine-tuning (MT), have shown the capability to generalize to unseen tasks. Previous work has shown that scaling the number of training…

Computation and Language · Computer Science 2023-02-10 Joel Jang , Seungone Kim , Seonghyeon Ye , Doyoung Kim , Lajanugen Logeswaran , Moontae Lee , Kyungjae Lee , Minjoon Seo

The application of Natural Language Processing (NLP) has achieved a high level of relevance in several areas. In the field of software engineering (SE), NLP applications are based on the classification of similar texts (e.g. software…

Software Engineering · Computer Science 2021-12-02 Eliane Maria De Bortoli Fávero , Dalcimar Casanova
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