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The importance of improving the FAIRness (findability, accessibility, interoperability, reusability) of research data is undeniable, especially in the face of large, complex datasets currently being produced by omics technologies.…

Ontologies are formal representations of concepts and complex relationships among them. They have been widely used to capture comprehensive domain knowledge in areas such as biology and medicine, where large and complex ontologies can…

Human-Computer Interaction · Computer Science 2019-10-24 Ying Yang , Michael Wybrow , Yuan-Fang Li , Tobias Czauderna , Yongqun He

Ontology interoperability is one of the complicated issues that restricts the use of ontologies in knowledge graphs (KGs). Different ontologies with conflicting and overlapping concepts make it difficult to design, develop, and deploy an…

Information Retrieval · Computer Science 2026-03-23 Zhangcheng Qiang

Ontology alignment (a.k.a ontology matching (OM)) plays a critical role in knowledge integration. Owing to the success of machine learning in many domains, it has been applied in OM. However, the existing methods, which often adopt ad-hoc…

Artificial Intelligence · Computer Science 2022-05-05 Yuan He , Jiaoyan Chen , Denvar Antonyrajah , Ian Horrocks

This work presents the architecture used in the ongoing OntologyNavigator project. It is a research tool to help advanced learners to find adapted IT papers to create scientific bibliographies. The purpose is the use of an IT representation…

Information Retrieval · Computer Science 2012-02-07 Gérald Kembellec , Imad Saleh , Catherine Sauvaget

We explore the role of ontologies in enhancing hybrid modeling and simulation through improved semantic rigor, model reusability, and interoperability across systems, disciplines, and tools. By distinguishing between methodological and…

Artificial Intelligence · Computer Science 2025-06-17 John Beverley , Andreas Tolk

Ontology Matching aims to find a set of semantic correspondences, called an alignment, between related ontologies. In recent years, there has been a growing interest in efficient and effective matching methods for large ontologies. However,…

Artificial Intelligence · Computer Science 2013-07-23 Emanuel Santos , Daniel Faria , Cátia Pesquita , Francisco Couto

Ontology alignment is the task of identifying semantically equivalent entities from two given ontologies. Different ontologies have different representations of the same entity, resulting in a need to de-duplicate entities when merging…

Computation and Language · Computer Science 2018-06-22 Lucy Lu Wang , Chandra Bhagavatula , Mark Neumann , Kyle Lo , Chris Wilhelm , Waleed Ammar

The development of a company often entails the emergence of autonomous data sources with different structural and technological organization. This can lead to the inability of data analysis at a high level and a violation of the integrity…

Information Retrieval · Computer Science 2022-01-14 A. Kalinin , E. Shikov , D. Vaganov , A. Lysenko

Taking advantage of the widespread use of ontologies to organise and harmonize knowledge across several distinct domains, this paper proposes a novel approach to improve an embedding-Large Language Model (embedding-LLM) of interest by…

Computation and Language · Computer Science 2024-06-03 Francesco Ronzano , Jay Nanavati

The metadata about scientific experiments published in online repositories have been shown to suffer from a high degree of representational heterogeneity---there are often many ways to represent the same type of information, such as a…

Computation and Language · Computer Science 2020-12-17 Rafael S. Gonçalves , Maulik R. Kamdar , Mark A. Musen

The ability to reason with and integrate different sensory inputs is the foundation underpinning human intelligence and it is the reason for the growing interest in modelling multi-modal information within Knowledge Graphs. Multi-Modal…

Artificial Intelligence · Computer Science 2024-10-18 Gianluca Apriceno , Valentina Tamma , Tania Bailoni , Jacopo de Berardinis , Mauro Dragoni

This article first lists reasons why - in the long term or when creating a new knowledge base (KB) for general knowledge sharing purposes - collaboratively building a well-organized KB does/can provide more possibilities, with on the whole…

Artificial Intelligence · Computer Science 2013-05-31 Philippe A. Martin

Ontologies have been widely used in numerous and varied applications, e.g., to support data modeling, information integration, and knowledge management. With the increasing size of ontologies, ontology understanding, which is playing an…

Information Retrieval · Computer Science 2018-05-17 Seyedamin Pouriyeh , Mehdi Allahyari , Qingxia Liu , Gong Cheng , Hamid Reza Arabnia , Yuzhong Qu , Krys Kochut

Administration of a Web directory and maintenance of its content and the associated structure is a delicate and labor intensive task performed exclusively by human domain experts. Subsequently there is an imminent risk of a directory…

Information Retrieval · Computer Science 2013-02-12 Marko Horvat , Gordan Gledec , Nikola Bogunović

Ontologies represent the conceptual knowledge of a domain. At the core of an ontology is the taxonomy of concepts and subconcepts that represent specific entities, which can be complex to build. In many cases, information is available in…

Artificial Intelligence · Computer Science 2026-05-26 Mathieu d'Aquin

Taxonomies and ontologies of research topics (e.g., MeSH, UMLS, CSO, NLM) play a central role in providing the primary framework through which intelligent systems can explore and interpret the literature. However, these resources have…

Digital Libraries · Computer Science 2025-08-07 Alessia Pisu , Livio Pompianu , Francesco Osborne , Diego Reforgiato Recupero , Daniele Riboni , Angelo Salatino

Interoperability is a feature required by the Semantic Web. It is provided by the ontology matching methods and algorithms. But now ontologies are presented not only in English, but in other languages as well. It is important to use an…

Information Retrieval · Computer Science 2011-10-27 Feiyu Lin , Andrew Krizhanovsky

Ontology is a general term used by researchers who want to share information in a specific domain. One of the hallmarks of the greatest success of a powerful manager of an organization is his ability to interpret unplanned and unrelated…

Computers and Society · Computer Science 2025-03-11 Neda Bagherzadeh , Saeed Setayeshi , Samaneh Yazdani

Enormous explosion in the number of the World Wide Web pages occur every day and since the efficiency of most of the information processing systems is found to be less, the potential of the Internet applications is often underutilized.…

Information Retrieval · Computer Science 2011-09-13 L. Jegatha Deborah , R. Baskaran , A. Kannan