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Ventricular volume and its progression are known to be linked to several brain diseases such as dementia and schizophrenia. Therefore accurate measurement of ventricle volume is vital for longitudinal studies on these disorders, making…

Computer Vision and Pattern Recognition · Computer Science 2018-03-06 Mohsen Ghafoorian , Jonas Teuwen , Rashindra Manniesing , Frank-Erik de Leeuw , Bram van Ginneken , Nico Karssemeijer , Bram Platel

Data cleaning consumes about 80% of the time spent on data analysis for clinical research projects. This is a much bigger problem in the era of big data and machine learning in the field of medicine where large volumes of data are being…

Medical Physics · Physics 2018-01-03 Timothy Rozario , Troy Long , Mingli Chen , Weiguo Lu , Steve Jiang

Deep neural networks have emerged as effective tools for computational imaging including quantitative phase microscopy of transparent samples. To reconstruct phase from intensity, current approaches rely on supervised learning with training…

Image and Video Processing · Electrical Eng. & Systems 2020-01-28 Emrah Bostan , Reinhard Heckel , Michael Chen , Michael Kellman , Laura Waller

Despite the success of deep learning methods in medical image segmentation tasks, the human-level performance relies on massive training data with high-quality annotations, which are expensive and time-consuming to collect. The fact is that…

Computer Vision and Pattern Recognition · Computer Science 2021-06-22 Jialin Shi , Ji Wu

In the field of medical imaging, the advent of deep learning, especially the application of convolutional neural networks (CNNs) has revolutionized the analysis and interpretation of medical images. Nevertheless, deep learning methods…

Computer Vision and Pattern Recognition · Computer Science 2025-04-28 Xin Li , Wenhui Zhu , Peijie Qiu , Oana M. Dumitrascu , Amal Youssef , Yalin Wang

The use of neural networks for diagnosis classification is becoming more and more prevalent in the medical imaging community. However, deep learning method outputs remain hard to explain. Another difficulty is to choose among the large…

Image and Video Processing · Electrical Eng. & Systems 2020-02-11 Elina Thibeau Sutre , Olivier Colliot , Didier Dormont , Ninon Burgos

Fine-grained image classification, which aims to distinguish images with subtle distinctions, is a challenging task due to two main issues: lack of sufficient training data for every class and difficulty in learning discriminative features…

Computer Vision and Pattern Recognition · Computer Science 2017-07-05 Aoxue Li , Zhiwu Lu , Liwei Wang , Tao Xiang , Xinqi Li , Ji-Rong Wen

Collecting large training datasets, annotated with high-quality labels, is costly and time-consuming. This paper proposes a novel framework for training deep convolutional neural networks from noisy labeled datasets that can be obtained…

Machine Learning · Computer Science 2017-11-06 Arash Vahdat

Deep learning (DL) has arguably emerged as the method of choice for the detection and segmentation of biological structures in microscopy images. However, DL typically needs copious amounts of annotated training data that is for biomedical…

Image and Video Processing · Electrical Eng. & Systems 2020-03-20 Mangal Prakash , Tim-Oliver Buchholz , Manan Lalit , Pavel Tomancak , Florian Jug , Alexander Krull

Staining is essential in cell imaging and medical diagnostics but poses significant challenges, including high cost, time consumption, labor intensity, and irreversible tissue alterations. Recent advances in deep learning have enabled…

Computer Vision and Pattern Recognition · Computer Science 2025-04-15 Ziwang Xu , Lanqing Guo , Satoshi Tsutsui , Shuyan Zhang , Alex C. Kot , Bihan Wen

This paper reported a bespoke adder-based deep learning network for time-domain fluorescence lifetime imaging (FLIM). By leveraging the l1-norm extraction method, we propose a 1-D Fluorescence Lifetime AdderNet (FLAN) without…

Signal Processing · Electrical Eng. & Systems 2022-09-13 Zhenya Zang , Dong Xiao , Quan Wang , Ziao Jiao , Chen Yu , David Day-Uei Li

The high-content image-based assay is commonly leveraged for identifying the phenotypic impact of genetic perturbations in biology field. However, a persistent issue remains unsolved during experiments: the interferential technical noise…

Image and Video Processing · Electrical Eng. & Systems 2022-12-09 Sen Yang , Tao Shen , Yuqi Fang , Xiyue Wang , Jun Zhang , Wei Yang , Junzhou Huang , Xiao Han

The recent success of deep neural networks is powered in part by large-scale well-labeled training data. However, it is a daunting task to laboriously annotate an ImageNet-like dateset. On the contrary, it is fairly convenient, fast, and…

Computer Vision and Pattern Recognition · Computer Science 2018-03-23 Yifan Ding , Liqiang Wang , Deliang Fan , Boqing Gong

Deep convolutional neural networks (CNNs) learned on large-scale labeled samples have achieved remarkable progress in computer vision, such as image/video classification. The cheapest way to obtain a large body of labeled visual data is to…

Computer Vision and Pattern Recognition · Computer Science 2020-10-01 Zhenzhen Wang , Chunyan Xu , Yap-Peng Tan , Junsong Yuan

Images are an important data source for diagnosis and treatment of oral diseases. The manual classification of images may lead to misdiagnosis or mistreatment due to subjective errors. In this paper an image classification model based on…

Computer Vision and Pattern Recognition · Computer Science 2017-05-26 Sultan Imangaliyev , Monique H. van der Veen , Catherine M. C. Volgenant , Bruno G. Loos , Bart J. F. Keijser , Wim Crielaard , Evgeni Levin

In this paper, we present contemporary techniques for visualising the feature space of a deep learning image classification neural network. These techniques are viewed in the context of a feed-forward network trained to classify low…

Computer Vision and Pattern Recognition · Computer Science 2018-11-16 Ezra Webb , Cheng Lei , Chun-Jung Huang , Hirofumi Kobayashi , Hideharu Mikami , Keisuke Goda

Arterial spin labeling (ASL) allows to quantify the cerebral blood flow (CBF) by magnetic labeling of the arterial blood water. ASL is increasingly used in clinical studies due to its noninvasiveness, repeatability and benefits in…

Computer Vision and Pattern Recognition · Computer Science 2018-06-13 Cagdas Ulas , Giles Tetteh , Stephan Kaczmarz , Christine Preibisch , Bjoern H. Menze

Assessing the quality of bovine satellite cells (BSCs) is essential for the cultivated meat industry, which aims to address global food sustainability challenges. This study aims to develop a label-free method for predicting fluorescence…

Computer Vision and Pattern Recognition · Computer Science 2024-10-18 Sania Sinha , Aarham Wasit , Won Seob Kim , Jongkyoo Kim , Jiyoon Yi

Cell segmentation is essential in biomedical research for analyzing cellular morphology and behavior. Deep learning methods, particularly convolutional neural networks (CNNs), have revolutionized cell segmentation by extracting intricate…

Image and Video Processing · Electrical Eng. & Systems 2024-08-27 Boyuan Peng , Jiaju Chen , P. Bilha Githinji , Ijaz Gul , Qihui Ye , Minjiang Chen , Peiwu Qin , Xingru Huang , Chenggang Yan , Dongmei Yu , Jiansong Ji , Zhenglin Chen

Over the last decade, scanning transmission electron microscopy (STEM) has emerged as a powerful tool for probing atomic structures of complex materials with picometer precision, opening the pathway toward exploring ferroelectric,…

Data Analysis, Statistics and Probability · Physics 2021-12-23 Ayana Ghosh , Christopher T. Nelson , Mark Oxley , Xiaohang Zhang , Maxim Ziatdinov , Ichiro Takeuchi , Sergei V. Kalinin