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The advancement of human healthspan and bioengineering relies heavily on predicting the behavior of complex biological systems. While high-throughput multiomics data is becoming increasingly abundant, converting this data into actionable…

Machine Learning · Computer Science 2025-12-10 Udesh Habaraduwa , Andrei Lixandru

We study the ability of neural networks to calculate feedback control signals that steer trajectories of continuous time non-linear dynamical systems on graphs, which we represent with neural ordinary differential equations (neural ODEs).…

Machine Learning · Computer Science 2022-06-22 Thomas Asikis , Lucas Böttcher , Nino Antulov-Fantulin

We perform scalable approximate inference in continuous-depth Bayesian neural networks. In this model class, uncertainty about separate weights in each layer gives hidden units that follow a stochastic differential equation. We demonstrate…

Machine Learning · Statistics 2022-02-01 Winnie Xu , Ricky T. Q. Chen , Xuechen Li , David Duvenaud

Neural ODEs and i-ResNet are recently proposed methods for enforcing invertibility of residual neural models. Having a generic technique for constructing invertible models can open new avenues for advances in learning systems, but so far…

Machine Learning · Computer Science 2020-03-03 Han Zhang , Xi Gao , Jacob Unterman , Tom Arodz

This paper introduces a novel algorithmic framework for a deep neural network (DNN), which in a mathematically rigorous manner, allows us to incorporate history (or memory) into the network -- it ensures all layers are connected to one…

Optimization and Control · Mathematics 2020-04-03 Harbir Antil , Ratna Khatri , Rainald Löhner , Deepanshu Verma

We introduce OS-net (Orbitally Stable neural NETworks), a new family of neural network architectures specifically designed for periodic dynamical data. OS-net is a special case of Neural Ordinary Differential Equations (NODEs) and takes…

Dynamical Systems · Mathematics 2023-09-27 Marieme Ngom , Carlo Graziani

To derive the hidden dynamics from observed data is one of the fundamental but also challenging problems in many different fields. In this study, we propose a new type of interpretable network called the ordinary differential equation…

Dynamical Systems · Mathematics 2020-10-19 Pipi Hu , Wuyue Yang , Yi Zhu , Liu Hong

We develop a numerical method to reconstruct systems of ordinary differential equations (ODEs) from time series data without {\it a priori} knowledge of the underlying ODEs using sparse basis learning and sparse function reconstruction. We…

Data Analysis, Statistics and Probability · Physics 2016-05-19 Manuel Mai , Mark D. Shattuck , Corey S. O'Hern

In this work, we introduce and study a class of Deep Neural Networks (DNNs) in continuous-time. The proposed architecture stems from the combination of Neural Ordinary Differential Equations (Neural ODEs) with the model structure of…

Systems and Control · Electrical Eng. & Systems 2023-09-18 Daniele Martinelli , Clara Lucía Galimberti , Ian R. Manchester , Luca Furieri , Giancarlo Ferrari-Trecate

Causal inference in continuous-time sequential decision problems is challenged by hidden confounders. We show that, in latent state-space models with time-varying interventions, observability of the latent dynamics from observed data is…

Machine Learning · Computer Science 2026-05-14 Jennifer Wendland , Nicolas Freitag , Maik Kschischo

Implicit Neural Spatial Representation (INSR) has emerged as an effective representation of spatially-dependent vector fields. This work explores solving time-dependent PDEs with INSR. Classical PDE solvers introduce both temporal and…

Machine Learning · Computer Science 2023-06-01 Honglin Chen , Rundi Wu , Eitan Grinspun , Changxi Zheng , Peter Yichen Chen

The well-known generalization problem hinders the application of artificial neural networks in continuous-time prediction tasks with varying latent dynamics. In sharp contrast, biological systems can neatly adapt to evolving environments…

Machine Learning · Computer Science 2025-03-10 Jindou Jia , Zihan Yang , Meng Wang , Kexin Guo , Jianfei Yang , Xiang Yu , Lei Guo

We use neural ordinary differential equations to formulate a variant of the Transformer that is depth-adaptive in the sense that an input-dependent number of time steps is taken by the ordinary differential equation solver. Our goal in…

Machine Learning · Computer Science 2020-10-23 Aaron Baier-Reinio , Hans De Sterck

We propose a new class of parameterizations for spatio-temporal point processes which leverage Neural ODEs as a computational method and enable flexible, high-fidelity models of discrete events that are localized in continuous time and…

Machine Learning · Computer Science 2021-03-19 Ricky T. Q. Chen , Brandon Amos , Maximilian Nickel

Classical neural ordinary differential equations (ODEs) are powerful tools for approximating the log-density functions in high-dimensional spaces along trajectories, where neural networks parameterize the velocity fields. This paper…

Optimization and Control · Mathematics 2025-01-30 Mo Zhou , Stanley Osher , Wuchen Li

Deep neural networks have become invaluable tools for supervised machine learning, e.g., classification of text or images. While often offering superior results over traditional techniques and successfully expressing complicated patterns in…

Machine Learning · Computer Science 2019-02-19 Eldad Haber , Lars Ruthotto

Ordinary differential equations (ODEs) can provide mechanistic models of temporally local changes of processes, where parameters are often informed by external knowledge. While ODEs are popular in systems modeling, they are less established…

Methodology · Statistics 2025-07-10 Maren Hackenberg , Astrid Pechmann , Clemens Kreutz , Janbernd Kirschner , Harald Binder

We introduce a unified framework -- Quantum Neural Ordinary and Partial Differential Equations (QNODEs and QNPDEs) -- which extends the continuous-time formalism of classical neural ordinary and partial differential equations into quantum…

Quantum Physics · Physics 2026-01-13 Yu Cao , Shi Jin , Nana Liu

We propose a method to reproduce dynamic appearance textures with space-stationary but time-varying visual statistics. While most previous work decomposes dynamic textures into static appearance and motion, we focus on dynamic appearance…

Computer Vision and Pattern Recognition · Computer Science 2025-01-13 Chen Liu , Tobias Ritschel

Scientific machine learning is an emerging field that broadly describes the combination of scientific computing and machine learning to address challenges in science and engineering. Within the context of differential equations, this has…

Machine Learning · Computer Science 2026-04-03 Laurens R. Lueg , Victor Alves , Daniel Schicksnus , John R. Kitchin , Carl D. Laird , Lorenz T. Biegler