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Convolutional neural networks (CNNs) have been extensively applied for image recognition problems giving state-of-the-art results on recognition, detection, segmentation and retrieval. In this work we propose and evaluate several deep…

Computer Vision and Pattern Recognition · Computer Science 2015-04-14 Joe Yue-Hei Ng , Matthew Hausknecht , Sudheendra Vijayanarasimhan , Oriol Vinyals , Rajat Monga , George Toderici

U-Net and its variants have been widely used in medical image segmentation. However, most current U-Net variants confine their improvement strategies to building more complex encoder, while leaving the decoder unchanged or adopting a simple…

Image and Video Processing · Electrical Eng. & Systems 2023-10-30 Weibin Yang , Longwei Xu , Pengwei Wang , Dehua Geng , Yusong Li , Mingyuan Xu , Zhiqi Dong

Brain tumor segmentation plays a pivotal role in medical image processing. In this work, we aim to segment brain MRI volumes. 3D convolution neural networks (CNN) such as 3D U-Net and V-Net employing 3D convolutions to capture the…

Computer Vision and Pattern Recognition · Computer Science 2019-09-24 Chen Chen , Xiaopeng Liu , Meng Ding , Junfeng Zheng , Jiangyun Li

Neural networks are becoming more and more popular for the analysis of physiological time-series. The most successful deep learning systems in this domain combine convolutional and recurrent layers to extract useful features to model…

Machine Learning · Computer Science 2019-10-25 Mathias Perslev , Michael Hejselbak Jensen , Sune Darkner , Poul Jørgen Jennum , Christian Igel

Retinal vessel segmentation is an essential step for fundus image analysis. With the recent advances of deep learning technologies, many convolutional neural networks have been applied in this field, including the successful U-Net. In this…

Image and Video Processing · Electrical Eng. & Systems 2019-11-11 Weilin Fu , Katharina Breininger , Zhaoya Pan , Andreas Maier

Regularization in convolutional neural networks (CNNs) is usually addressed with dropout layers. However, dropout is sometimes detrimental in the convolutional part of a CNN as it simply sets to zero a percentage of pixels in the feature…

Image and Video Processing · Electrical Eng. & Systems 2021-08-29 Juan P. Vigueras-Guillén , Joan Lasenby , Frank Seeliger

This thesis studies how the segmentation results, produced by convolutional neural networks (CNN), is different from each other when applied to small biomedical datasets. We use different architectures, parameters and hyper-parameters,…

Image and Video Processing · Electrical Eng. & Systems 2020-11-04 Vitaly Nikolaev

Convolutional neural networks (CNNs) and Transformer-based models are being widely applied in medical image segmentation thanks to their ability to extract high-level features and capture important aspects of the image. However, there is…

Image and Video Processing · Electrical Eng. & Systems 2023-07-04 Binh-Duong Dinh , Thanh-Thu Nguyen , Thi-Thao Tran , Van-Truong Pham

Machine learning is widely used to analyze biological sequence data. Non-sequential models such as SVMs or feed-forward neural networks are often used although they have no natural way of handling sequences of varying length. Recurrent…

Quantitative Methods · Quantitative Biology 2016-03-14 Søren Kaae Sønderby , Casper Kaae Sønderby , Henrik Nielsen , Ole Winther

Purpose: Manual medical image segmentation is an exhausting and time-consuming task along with high inter-observer variability. In this study, our objective is to improve the multi-resolution image segmentation performance of U-Net…

Image and Video Processing · Electrical Eng. & Systems 2020-07-20 Simindokht Jahangard , Mohammad Hossein Zangooei , Maysam Shahedi

We use multilayer Long Short Term Memory (LSTM) networks to learn representations of video sequences. Our model uses an encoder LSTM to map an input sequence into a fixed length representation. This representation is decoded using single or…

Machine Learning · Computer Science 2016-01-05 Nitish Srivastava , Elman Mansimov , Ruslan Salakhutdinov

Feed-forward neural networks consist of a sequence of layers, in which each layer performs some processing on the information from the previous layer. A downside to this approach is that each layer (or module, as multiple modules can…

Machine Learning · Computer Science 2020-10-19 Alex Lamb , Anirudh Goyal , Agnieszka Słowik , Michael Mozer , Philippe Beaudoin , Yoshua Bengio

This paper presents a new framework for human body part segmentation based on Deep Convolutional Neural Networks trained using only synthetic data. The proposed approach achieves cutting-edge results without the need of training the models…

Computer Vision and Pattern Recognition · Computer Science 2022-06-08 Alessandro Saviolo , Matteo Bonotto , Daniele Evangelista , Marco Imperoli , Jacopo Lazzaro , Emanuele Menegatti , Alberto Pretto

Recent advances in transformer-based models have drawn attention to exploring these techniques in medical image segmentation, especially in conjunction with the U-Net model (or its variants), which has shown great success in medical image…

Image and Video Processing · Electrical Eng. & Systems 2021-10-22 Xiangyi Yan , Hao Tang , Shanlin Sun , Haoyu Ma , Deying Kong , Xiaohui Xie

Neural networks are composed of multiple layers arranged in a hierarchical structure jointly trained with a gradient-based optimization, where the errors are back-propagated from the last layer back to the first one. At each optimization…

Machine Learning · Computer Science 2023-01-05 Firas Laakom , Jenni Raitoharju , Alexandros Iosifidis , Moncef Gabbouj

Deep neural networks are increasingly being used in cognitive modeling as a means of deriving representations for complex stimuli such as images. While the predictive power of these networks is high, it is often not clear whether they also…

Neurons and Cognition · Quantitative Biology 2020-06-01 Aditi Jha , Joshua Peterson , Thomas L. Griffiths

The hippocampus plays a vital role in the diagnosis and treatment of many neurological disorders. Recent years, deep learning technology has made great progress in the field of medical image segmentation, and the performance of related…

Computer Vision and Pattern Recognition · Computer Science 2022-11-16 Heyu Huang , Runmin Cong , Lianhe Yang , Ling Du , Cong Wang , Sam Kwong

Clipping, as a current nonlinear distortion, often occurs due to the limited dynamic range of audio recorders. It degrades the speech quality and intelligibility and adversely affects the performances of speech and speaker recognitions. In…

Audio and Speech Processing · Electrical Eng. & Systems 2019-10-29 Hamidreza Baradaran Kashani , Ata Jodeiri , Mohammad Mohsen Goodarzi , Shabnam Gholamdokht Firooz

In this paper we propose a deep learning approach for segmenting sub-cortical structures of the human brain in Magnetic Resonance (MR) image data. We draw inspiration from a state-of-the-art Fully-Convolutional Neural Network (F-CNN)…

Computer Vision and Pattern Recognition · Computer Science 2016-02-08 Mahsa Shakeri , Stavros Tsogkas , Enzo Ferrante , Sarah Lippe , Samuel Kadoury , Nikos Paragios , Iasonas Kokkinos

Accurate and reliable image segmentation is an essential part of biomedical image analysis. In this paper, we consider the problem of biomedical image segmentation using deep convolutional neural networks. We propose a new end-to-end…

Computer Vision and Pattern Recognition · Computer Science 2018-10-02 Amirhossein Dadashzadeh , Alireza Tavakoli Targhi