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Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-protein interactions, etc. A common setting involves inferring network edges…

Quantitative Methods · Quantitative Biology 2007-05-23 Jean-Philippe Vert , Jian Qiu , William Stafford Noble

Many neuroimaging studies focus on the cortex, in order to benefit from better signal to noise ratios and reduced computational burden. Cortical data are usually projected onto a reference mesh, where subsequent analyses are carried out.…

Computer Vision and Pattern Recognition · Computer Science 2017-04-28 Nicolas Honnorat , Christos Davatzikos

We here propose a machine learning approach for monitoring particle detectors in real-time. The goal is to assess the compatibility of incoming experimental data with a reference dataset, characterising the data behaviour under normal…

High Energy Physics - Experiment · Physics 2023-03-10 Gaia Grosso , Nicolò Lai , Marco Letizia , Jacopo Pazzini , Marco Rando , Lorenzo Rosasco , Andrea Wulzer , Marco Zanetti

The kernel matrix used in kernel methods encodes all the information required for solving complex nonlinear problems defined on data representations in the input space using simple, but implicitly defined, solutions. Spectral analysis on…

Machine Learning · Computer Science 2020-10-26 Alexandros Iosifidis

A fundamental task in kernel methods is to pick nodes and weights, so as to approximate a given function from an RKHS by the weighted sum of kernel translates located at the nodes. This is the crux of kernel density estimation, kernel…

Machine Learning · Statistics 2020-02-25 Ayoub Belhadji , Rémi Bardenet , Pierre Chainais

Kernel means are frequently used to represent probability distributions in machine learning problems. In particular, the well known kernel density estimator and the kernel mean embedding both have the form of a kernel mean. Unfortunately,…

Machine Learning · Statistics 2015-03-03 E. Cruz Cortés , C. Scott

Convex clustering is a well-regarded clustering method, resembling the similar centroid-based approach of Lloyd's $k$-means, without requiring a predefined cluster count. It starts with each data point as its centroid and iteratively merges…

Machine Learning · Statistics 2026-05-15 Shubhayan Pan , Kushal Bose , Debolina Paul , Saptarshi Chakraborty , Swagatam Das

A multilevel kernel-based interpolation method, suitable for moderately high-dimensional function interpolation problems, is proposed. The method, termed multilevel sparse kernel-based interpolation (MLSKI, for short), uses both level-wise…

Numerical Analysis · Mathematics 2012-04-19 Emmanuil H. Georgoulis , Jeremy Levesley , Fazli Subhan

In the era of big data, it is desired to develop efficient machine learning algorithms to tackle massive data challenges such as storage bottleneck, algorithmic scalability, and interpretability. In this paper, we develop a novel efficient…

Machine Learning · Computer Science 2022-11-14 Jinshan Zeng , Minrun Wu , Shao-Bo Lin , Ding-Xuan Zhou

Many data clustering applications must handle objects that cannot be represented as vectors. In this context, the bag-of-vectors representation describes complex objects through discrete distributions, for which the Wasserstein distance…

Machine Learning · Computer Science 2025-10-15 Alfredo Oneto , Blazhe Gjorgiev , Giovanni Sansavini

Fast approximations to matrix multiplication have the potential to dramatically reduce the cost of neural network inference. Recent work on approximate matrix multiplication proposed to replace costly multiplications with table-lookups by…

Machine Learning · Computer Science 2022-07-14 Calvin McCarter , Nicholas Dronen

This work is concerned with the kernel-based approximation of a complex-valued function from data, where the frequency response function of a partial differential equation in the frequency domain is of particular interest. In this setting,…

Computational Engineering, Finance, and Science · Computer Science 2024-11-26 Julien Bect , Niklas Georg , Ulrich Römer , Sebastian Schöps

We propose a deep learning approach for discovering kernels tailored to identifying clusters over sample data. Our neural network produces sample embeddings that are motivated by--and are at least as expressive as--spectral clustering. Our…

Machine Learning · Computer Science 2020-01-03 Chieh Wu , Zulqarnain Khan , Yale Chang , Stratis Ioannidis , Jennifer Dy

The hierarchical Dirichlet process (HDP) has become an important Bayesian nonparametric model for grouped data, such as document collections. The HDP is used to construct a flexible mixed-membership model where the number of components is…

Machine Learning · Statistics 2012-01-10 Chong Wang , David M. Blei

We present a distributed-memory library for computations with dense structured matrices. A matrix is considered structured if its off-diagonal blocks can be approximated by a rank-deficient matrix with low numerical rank. Here, we use…

Mathematical Software · Computer Science 2015-06-29 François-Henry Rouet , Xiaoye S. Li , Pieter Ghysels , Artem Napov

Deep networks are nowadays becoming popular in many computer vision and pattern recognition tasks. Among these networks, deep kernels are particularly interesting and effective, however, their computational complexity is a major issue…

Computer Vision and Pattern Recognition · Computer Science 2018-12-24 Hichem Sahbi

Several statistical approaches based on reproducing kernels have been proposed to detect abrupt changes arising in the full distribution of the observations and not only in the mean or variance. Some of these approaches enjoy good…

Statistics Theory · Mathematics 2017-10-13 Alain Celisse , Guillemette Marot , Morgane Pierre-Jean , Guillem Rigaill

There has been a large increase in the amount of work on hierarchical low-rank approximation methods, where the interest is shared by multiple communities that previously did not intersect. This objective of this article is two-fold; to…

Numerical Analysis · Computer Science 2016-02-09 Rio Yokota , Huda Ibeid , David Keyes

In this contribution, kernel approximations are applied as ansatz functions within the Deep Ritz method. This allows to approximate weak solutions of elliptic partial differential equations with weak enforcement of boundary conditions using…

Numerical Analysis · Mathematics 2024-10-07 Hendrik Kleikamp , Tizian Wenzel

Motivated by multi-distribution divergences, which originate in information theory, we propose a notion of `multi-point' kernels, and study their applications. We study a class of kernels based on Jensen type divergences and show that these…

Machine Learning · Computer Science 2016-11-17 Debarghya Ghoshdastidar , Ambedkar Dukkipati , Ajay P. Adsul , Aparna S. Vijayan