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Related papers: Bistability and time crystals in long-ranged direc…

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Bistability is considered wide-spread among bacteria and eukaryotic cells, useful e.g. for enzyme induction, bet hedging, and epigenetic switching. However, this phenomenon has mostly been described with deterministic dynamic or well-mixed…

Subcellular Processes · Quantitative Biology 2017-02-08 Robert G. Endres

For an interacting spatio-temporal lattice system we introduce a formal way of expressing multi-time correlation functions of local observables located at the same spatial point with a time state, i.e. a statistical distribution of…

Statistical Mechanics · Physics 2020-08-20 Katja Klobas , Matthieu Vanicat , Juan P. Garrahan , Tomaž Prosen

We describe a new algorithm for simulating complex Markoff-processes. We have used a reaction-cell method in order to simulate arbitrary reactions. It can be used for any kind of RDS on arbitrary topologies, including fractal dimensions or…

chem-ph · Physics 2009-10-28 Thomas Fricke , Dietmar Wendt

Bistable autonomous systems can be found inmany areas of science. When the intrinsic noise intensity is large, these systems exhibits stochastic transitions from onemetastable steady state to another. In electronic bistable memories, these…

Statistical Mechanics · Physics 2024-05-14 Léopold Van Brandt , Jean-Charles Delvenne

In a probabilistic cellular automaton in which all local transitions have positive probability, the problem of keeping a bit of information indefinitely is nontrivial, even in an infinite automaton. Still, there is a solution in 2…

Probability · Mathematics 2024-01-26 Peter Gacs

Cellular automata are a discrete dynamical system which models massively parallel computation. Much attention is devoted to computations with small time complexity for which the parallelism may provide further possibilities. In this paper,…

Formal Languages and Automata Theory · Computer Science 2012-08-15 Anaël Grandjean , Gaétan Richard , Véronique Terrier

Control of multistable dynamical system has important applications, from physics to biology. Here, we attack this problem from the perspective of local sensitivity analysis. We develop sensitivity rules to control properties of…

Optimization and Control · Mathematics 2022-06-08 Rodrigo Moreno-Morton , Alessio Franci

We consider the non-equilibrium behavior of a central spin system where the central spin is periodically reset to its ground state. The quantum mechanical evolution under this effectively dissipative dynamics is described by a discrete-time…

Quantum Physics · Physics 2022-11-01 Albert Cabot , Federico Carollo , Igor Lesanovsky

The goal of this paper is to show why the framework of communication complexity seems suitable for the study of cellular automata. Researchers have tackled different algorithmic problems ranging from the complexity of predicting to the…

Computational Complexity · Computer Science 2009-06-22 Eric Goles , Pierre-Etienne Meunier , Ivan Rapaport , Guillaume Theyssier

We present a simple mathematical model that captures the evolutionary capabilities of a prebiotic compartment or protocell. In the model the protocell contains an autocatalytic set whose chemical dynamics is coupled to the growth-division…

Populations and Evolution · Quantitative Biology 2023-10-31 Angad Yuvraj Singh , Sanjay Jain

The rates of activated processes, such as escape from a metastable state and nucleation, are exponentially sensitive to an externally applied field. We describe how this applies to modulation by high-frequency fields and illustrate it with…

Statistical Mechanics · Physics 2007-05-23 M. I. Dykman , Brage Golding

We show a dissipative phase transition in a driven nonlinear quantum oscillator in which a discrete time-translation symmetry is spontaneously broken in two different ways. The corresponding regimes display either discrete or incommensurate…

Quantum Physics · Physics 2024-08-13 Albert Cabot , Gianluca Giorgi , Roberta Zambrini

Delay is an inherent feature of genetic regulatory networks. It represents the time required for the assembly of functional regulator proteins. The protein production process is complex, as it includes transcription, translocation,…

Subcellular Processes · Quantitative Biology 2025-12-29 Sean Campbell , Courtney C. White , Amanda M. Alexander , William Ott

The large time dynamics of a periodically driven Fokker-Planck process possessing several metastable states is investigated. At weak noise transitions between the metastable states are rare. Their dynamics then represent a discrete…

Statistical Mechanics · Physics 2018-09-05 Changho Kim , Peter Talkner , Eok Kyun Lee , Peter Hanggi

An analytical method for investigation of the evolution of dynamical systems {\it with independent on time accuracy} is developed for perturbed Hamiltonian systems. The error-free estimation using of computer algebra enables the application…

Instrumentation and Methods for Astrophysics · Physics 2016-12-13 A. V. Gurzadyan , A. A. Kocharyan

We consider a nonequilibrium process on a timeline with discrete sites which evolves by a non-Markovian update rule in such a way that an active site at time t activates one or several sites in the future at time t+dt. The time intervals dt…

Statistical Mechanics · Physics 2009-02-10 Andre C. Barato , Haye Hinrichsen

Cells use temporal dynamical patterns to transmit information via signaling pathways. As optimality with respect to the environment plays a fundamental role in biological systems, organisms have evolved optimal ways to transmit information.…

Biological Physics · Physics 2016-12-21 Yoshihiko Hasegawa

A stochastic system where bistability is caused by noise has been recently investigated by Biancalani et al. (PRL 112:038101, 2014). They have computed the mean switching time for such a system using a continuous Fokker-Planck equation…

Statistical Mechanics · Physics 2015-06-23 Bahram Houchmandzadeh , Marcel Vallade

Physical systems with co-existence and interplay of processes featuring distinct spatio-temporal scales are found in various research areas ranging from studies of brain activity to astrophysics. Complexity of such systems makes their…

Shortcuts in a regular architecture affect the information transport through the system due to the severe decrease in average path length. A fundamental new perspective in terms of pattern formation is the destabilizing effect of…

Statistical Mechanics · Physics 2009-11-11 Carsten Marr , Marc-Thorsten Huett