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Related papers: On Adversarial Examples for Biomedical NLP Tasks

200 papers

Capturing sentence semantics plays a vital role in a range of text mining applications. Despite continuous efforts on the development of related datasets and models in the general domain, both datasets and models are limited in biomedical…

Computation and Language · Computer Science 2019-09-09 Qingyu Chen , Jingcheng Du , Sun Kim , W. John Wilbur , Zhiyong Lu

More recently, Bidirectional Encoder Representations from Transformers (BERT) was proposed and has achieved impressive success on many natural language processing (NLP) tasks such as question answering and language understanding, due mainly…

Computation and Language · Computer Science 2021-04-13 Shih-Hsuan Chiu , Berlin Chen

We study clinical Named Entity Recognition (NER) on the CADEC corpus and compare three families of approaches: (i) BERT-style encoders (BERT Base, BioClinicalBERT, RoBERTa-large), (ii) GPT-4o used with few-shot in-context learning (ICL)…

Computation and Language · Computer Science 2025-10-28 Andrei Baroian

Semantic parsing maps natural language (NL) utterances into logical forms (LFs), which underpins many advanced NLP problems. Semantic parsers gain performance boosts with deep neural networks, but inherit vulnerabilities against adversarial…

Computation and Language · Computer Science 2021-02-04 Shuo Huang , Zhuang Li , Lizhen Qu , Lei Pan

Transfer learning from pretrained language models recently became the dominant approach for solving many NLP tasks. A common approach to transfer learning for multiple tasks that maximize parameter sharing trains one or more task-specific…

Computation and Language · Computer Science 2021-06-03 Karen Hambardzumyan , Hrant Khachatrian , Jonathan May

Large pre-trained language models such as BERT have been the driving force behind recent improvements across many NLP tasks. However, BERT is only trained to predict missing words - either behind masks or in the next sentence - and has no…

Computation and Language · Computer Science 2020-10-26 Nicole Peinelt , Marek Rei , Maria Liakata

Professionals in modern healthcare systems are increasingly burdened by documentation workloads. Documentation of the initial patient anamnesis is particularly relevant, forming the basis of successful further diagnostic measures. However,…

Computation and Language · Computer Science 2020-11-04 Anton Schäfer , Nils Blach , Oliver Rausch , Maximilian Warm , Nils Krüger

Natural Language Processing (NLP) has been widely used in the semantic analysis in recent years. Our paper mainly discusses a methodology to analyze the effect that context has on human perception of similar words, which is the third task…

Computation and Language · Computer Science 2020-07-23 Wei Bao , Hongshu Che , Jiandong Zhang

Large Language Models (LLMs), particularly those similar to ChatGPT, have significantly influenced the field of Natural Language Processing (NLP). While these models excel in general language tasks, their performance in domain-specific…

Computation and Language · Computer Science 2024-01-02 Omid Rohanian , Mohammadmahdi Nouriborji , David A. Clifton

Large Language Models (LLMs) are increasingly adopted for applications in healthcare, reaching the performance of domain experts on tasks such as question answering and document summarisation. Despite their success on these tasks, it is…

Computation and Language · Computer Science 2025-05-20 Aishik Nagar , Viktor Schlegel , Thanh-Tung Nguyen , Hao Li , Yuping Wu , Kuluhan Binici , Stefan Winkler

The wide adoption of electronic health records (EHRs) has enabled a wide range of applications leveraging EHR data. However, the meaningful use of EHR data largely depends on our ability to efficiently extract and consolidate information…

Information Retrieval · Computer Science 2018-08-29 Yanshan Wang , Naveed Afzal , Sunyang Fu , Liwei Wang , Feichen Shen , Majid Rastegar-Mojarad , Hongfang Liu

As automatic speech recognition (ASR) systems are now being widely deployed in the wild, the increasing threat of adversarial attacks raises serious questions about the security and reliability of using such systems. On the other hand,…

Audio and Speech Processing · Electrical Eng. & Systems 2022-04-06 Nilaksh Das , Duen Horng Chau

Named Entity Recognition (NER) is a cornerstone NLP task while its robustness has been given little attention. This paper rethinks the principles of NER attacks derived from sentence classification, as they can easily violate the label…

Computation and Language · Computer Science 2023-05-10 Yifei Yang , Hongqiu Wu , Hai Zhao

The field of natural language processing (NLP) has made significant progress with the rapid development of deep learning technologies. One of the research directions in text sentiment analysis is sentiment analysis of medical texts, which…

Computation and Language · Computer Science 2024-12-04 Yinan Chen

Sentence embedding is an important research topic in natural language processing (NLP) since it can transfer knowledge to downstream tasks. Meanwhile, a contextualized word representation, called BERT, achieves the state-of-the-art…

Computation and Language · Computer Science 2020-06-02 Bin Wang , C. -C. Jay Kuo

Adversarial attack research in natural language processing (NLP) has made significant progress in designing powerful attack methods and defence approaches. However, few efforts have sought to identify which source samples are the most…

Computation and Language · Computer Science 2023-06-26 Vyas Raina , Mark Gales

Named Entity Recognition (NER) is a fundamental Natural Language Processing (NLP) task to extract entities from unstructured data. The previous methods for NER were based on machine learning or deep learning. Recently, pre-training models…

Computation and Language · Computer Science 2020-02-21 Yu Wang , Yining Sun , Zuchang Ma , Lisheng Gao , Yang Xu , Ting Sun

The adversarial attack literature contains a myriad of algorithms for crafting perturbations which yield pathological behavior in neural networks. In many cases, multiple algorithms target the same tasks and even enforce the same…

Machine Learning · Computer Science 2021-10-14 Hossein Souri , Pirazh Khorramshahi , Chun Pong Lau , Micah Goldblum , Rama Chellappa

The contextual word embedding model, BERT, has proved its ability on downstream tasks with limited quantities of annotated data. BERT and its variants help to reduce the burden of complex annotation work in many interdisciplinary research…

Computation and Language · Computer Science 2022-04-07 Gechuan Zhang , Paul Nulty , David Lillis

For large-scale IT corpora with hundreds of classes organized in a hierarchy, the task of accurate classification of classes at the higher level in the hierarchies is crucial to avoid errors propagating to the lower levels. In the business…

Computation and Language · Computer Science 2023-08-25 Yasmen Wahba , Nazim Madhavji , John Steinbacher