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The purpose of this research was to compare the robustness and performance of a local and global optimization algorithm when given the task of fitting the parameters of a common non-linear dose-response model utilized in the field of…

Neural and Evolutionary Computing · Computer Science 2020-12-18 Mark Connor , Michael O'Neill

Inverse optimization has been increasingly used to estimate unknown parameters in an optimization model based on decision data. We show that such a point estimation is insufficient in a prescriptive setting where the estimated parameters…

Optimization and Control · Mathematics 2025-02-11 Bo Lin , Erick Delage , Timothy C. Y. Chan

The optimization of dynamic problems is both widespread and difficult. When conducting dynamic optimization, a balance between reinitialization and computational expense has to be found. There are multiple approaches to this. In parallel…

Neural and Evolutionary Computing · Computer Science 2014-01-21 Ronald Hochreiter , Christoph Waldhauser

Machine learning algorithms frequently require careful tuning of model hyperparameters, regularization terms, and optimization parameters. Unfortunately, this tuning is often a "black art" that requires expert experience, unwritten rules of…

Machine Learning · Statistics 2012-08-30 Jasper Snoek , Hugo Larochelle , Ryan P. Adams

Evolutionary algorithms are metaheuristic techniques that derive inspiration from the natural process of evolution. They can efficiently solve (generate acceptable quality of solution in reasonable time) complex optimization (NP-Hard)…

Computer Vision and Pattern Recognition · Computer Science 2013-12-20 Anupriya Gogna , Akash Tayal

This paper makes a number of connections between life and various facets of genetic and evolutionary algorithms research. Specifically, it addresses the topics of adaptation, multiobjective optimization, decision making, deception, and…

Neural and Evolutionary Computing · Computer Science 2016-08-31 Fernando G. Lobo

It is essential that all algorithms are exhaustively, somewhat, and intelligently evaluated. Nonetheless, evaluating the effectiveness of optimization algorithms equitably and fairly is not an easy process for various reasons. Choosing and…

Nature-inspired algorithms are among the most powerful algorithms for optimization. In this study, a new nature-inspired metaheuristic optimization algorithm, called bat algorithm (BA), is introduced for solving engineering optimization…

Optimization and Control · Mathematics 2012-11-29 Xin-She Yang , Amir H. Gandomi

The dose delivered to the planning target volume by proton beams is highly conformal, sparing organs at risk and normal tissues. New treatment planning systems adapted to spot scanning techniques have been recently proposed to…

Medical Physics · Physics 2022-05-18 François Smekens , Nicolas Freud , Bruno Sixou , Guillaume Beslon , Jean M Létang

Bio-inspired learning has been gaining popularity recently given that Backpropagation (BP) is not considered biologically plausible. Many algorithms have been proposed in the literature which are all more biologically plausible than BP.…

Machine Learning · Computer Science 2023-08-31 Manas Gupta , Sarthak Ketanbhai Modi , Hang Zhang , Joon Hei Lee , Joo Hwee Lim

Computational methods have reshaped the landscape of modern biology. While the biomedical community is increasingly dependent on computational tools, the mechanisms ensuring open data, open software, and reproducibility are variably…

Other Quantitative Biology · Quantitative Biology 2020-07-28 Jaqueline J. Brito , Jun Li , Jason H. Moore , Casey S. Greene , Nicole A. Nogoy , Lana X. Garmire , Serghei Mangul

Biological and artificial information processing systems form representations of the world that they can use to categorize, reason, plan, navigate, and make decisions. How can we measure the similarity between the representations formed by…

The ideas of optimization of learning algorithms in Artificial Neural Networks are reviewed emphasizing generic properties and the online implementations are interpreted from a biological perspective. A simple model of the relevant…

Disordered Systems and Neural Networks · Physics 2017-02-08 N. Caticha , O. Kinouchi

Network inference is a rapidly advancing field, with new methods being proposed on a regular basis. Understanding the advantages and limitations of different network inference methods is key to their effective application in different…

Molecular Networks · Quantitative Biology 2016-09-15 Narsis A. Kiani , Hector Zenil , Jakub Olczak , Jesper Tegnér

Evolutionary computation offers a variety of tools to solve complex real-world optimization problems. However, research often focuses on smaller, simplified problems and optimization algorithms that sometimes miss expectations in real-world…

Optimization problems are crucial in artificial intelligence. Optimization algorithms are generally used to adjust the performance of artificial intelligence models to minimize the error of mapping inputs to outputs. Current evaluation…

Artificial Intelligence · Computer Science 2021-11-23 Zhicheng He

Finding relevant publications is important for scientists who have to cope with exponentially increasing numbers of scholarly material. Algorithms can help with this task as they help for music, movie, and product recommendations. However,…

Information Retrieval · Computer Science 2016-09-28 Titipat Achakulvisut , Daniel E. Acuna , Tulakan Ruangrong , Konrad Kording

The performance of many machine learning models depends on their hyper-parameter settings. Bayesian Optimization has become a successful tool for hyper-parameter optimization of machine learning algorithms, which aims to identify optimal…

Machine Learning · Computer Science 2020-08-04 Lidan Wang , Franck Dernoncourt , Trung Bui

Controlling an evolving population is an important task in modern molecular genetics, including directed evolution for improving the activity of molecules and enzymes, in breeding experiments in animals and in plants, and in devising public…

Populations and Evolution · Quantitative Biology 2021-03-10 Armita Nourmohammad , Ceyhun Eksin

In this paper, a novel bio-inspired optimization algorithm is proposed, called Bombardier Beetle Optimizer (BBO). This type of species is very intelligent, which has an ability to defense and escape from predators. The principles of the…

Neural and Evolutionary Computing · Computer Science 2025-10-21 Hisham A. Shehadeh , Mohd Yamani Idna Idris , Iqbal H. Jebril