Related papers: Enumerating Chemical Graphs with Two Disjoint Cycl…
Given a graph $G$, the maximal induced subgraphs problem asks to enumerate all maximal induced subgraphs of $G$ that belong to a certain hereditary graph class. While its optimization version, known as the minimum vertex deletion problem in…
The problem of map enumeration concerns counting connected spatial graphs, with a specified number $j$ of vertices, that can be embedded in a compact surface of genus $g$ in such a way that its complement yields a cellular decomposition of…
Graphs are widely used to model execution dependencies in applications. In particular, the NP-complete problem of partitioning a graph under constraints receives enormous attention by researchers because of its applicability in…
An \emph{outer-string representation} of a graph $G$ is an intersection representation of $G$ where vertices are represented by curves (strings) inside the unit disk and each curve has exactly one endpoint on the boundary of the unit disk…
Chemical graphs are simple undirected connected graphs, where vertices represent atoms in a molecule and edges represent chemical bonds. A degree-based topological index is a molecular descriptor used to study specific physicochemical…
In the Coloured Clustering problem, we wish to colour vertices of an edge coloured graph to produce as many stable edges as possible, i.e., edges with the same colour as their ends. In this paper, we reveal that the problem is in fact a…
A chorded cycle in a graph $G$ is a cycle on which two nonadjacent vertices are adjacent in the graph $G$. In 2010, Gao and Qiao independently proved a graph of order at least $4s$, in which the neighborhood union of any two nonadjacent…
A matching $M$ of a graph $G$ is maximal if it is not a proper subset of any other matching in $G$. Maximal matchings are much less known and researched than their maximum and perfect counterparts. In particular, almost nothing is known…
Drawings of non-planar graphs always result in edge crossings. When there are many edges crossing at small angles, it is often difficult to follow these edges, because of the multiple visual paths resulted from the crossings that slow down…
Using the theory of combinatorial species, we compute the cycle index for bipartite graphs, which we use to count unlabeled bipartite graphs and bipartite blocks.
In this paper we analyze the spectral gap of a weighted graph which is the difference between the smallest positive and largest negative eigenvalue of its adjacency matrix. Such a graph can represent e.g. a chemical organic molecule. Our…
We provide theoretical insights around the cutwidth of a graph and the One-Sided Crossing Minimization (OSCM) problem. OSCM was posed in the Parameterized Algorithms and Computational Experiments Challenge 2024, where the cutwidth of the…
We present a deterministic linear-time algorithm for finding an odd cycle through two specified vertices in an undirected graph. This is shown in a generalized form as follows: Let $\Gamma$ be any group in which every element is of order at…
Cycle packing is a fundamental problem in optimization, graph theory, and algorithms. Motivated by recent advancements in finding vertex-disjoint paths between a specified set of vertices that either minimize the total length of the paths…
A D2CS of a graph G is a set $S \subseteq V(G)$ with $diam(G[S]) \leq 2$. We study the problem of counting and enumerating D2CS of a graph. First we give an explicit formula for the number of D2CS in a complete k-ary tree, Fibonacci tree,…
introduce {\sc Planar Disjoint Paths Completion}, a completion counterpart of the Disjoint Paths problem, and study its parameterized complexity. The problem can be stated as follows: given a, not necessarily connected, plane graph $G,$ $k$…
Motivated by chemical applications, we revisit and extend a family of positive definite kernels for graphs based on the detection of common subtrees, initially proposed by Ramon et al. (2003). We propose new kernels with a parameter to…
A Meyniel obstruction is an odd cycle with at least five vertices and at most one chord. A graph is Meyniel if and only if it has no Meyniel obstruction as an induced subgraph. Here we give a O(n^2) algorithm that, for any graph, finds…
The problem of finding the maximum number of vertex-disjoint uni-color paths in an edge-colored graph (called MaxCDP) has been recently introduced in literature, motivated by applications in social network analysis. In this paper we…
Designing molecular structures with desired chemical properties is an essential task in drug discovery and material design. However, finding molecules with the optimized desired properties is still a challenging task due to combinatorial…