Related papers: Typical knots: size, link component count, and wri…
The values of writhe of the most tight conformations, found by the SONO algorithm, of all alternating prime knots with up to 10 crossings are analysed. The distribution of the writhe values is shown to be concentrated around the equally…
Knotted ribbons form an important topic in knot theory. They have applications in natural sciences, such as cyclic duplex DNA modeling. A flat knotted ribbon can be obtained by gently pulling a knotted ribbon tight so that it becomes flat…
Torsion and Betti numbers for knots are special cases of more general invariants associated to a finitely generated group G and epimorphism from G to the integers. The sequence of Betti numbers is always periodic; under mild hypotheses, the…
Non-classical virtual knots may have non-isomorphic upper and lower quandles. We exploit this property to define the quandle difference invariant, which can detect non-classicality by comparing the numbers of homomorphisms into a finite…
We study surface knots in 4-space by using generic planar projections. These projections have fold points and cusps as their singularities and the image of the singular point set divides the plane into several regions. The width (or the…
The ropelength of a knot is the minimum length required to tie it. Computational upper bounds have previously been computed for every prime knot with up to 11 crossings. Here, we present ropelength measurements for the 2176 knots with 12…
In this paper we present a sequence of link invariants, defined from twisted Alexander polynomials, and discuss their effectiveness in distinguish knots. In particular, we recast and extend by geometric means a recent result of Silver and…
We report on the geometry and mechanics of knotted stiff strings. We discuss both closed and open knots. Our two main results are: (i) Their equilibrium energy as well as the equilibrium tension for open knots depend on the type of knot as…
In this study we introduce and analyze the statistical structural properties of a model of growing networks which may be relevant to social networks. At each step a new node is added which selects 'k' possible partners from the existing…
We develop a topological model of knots and links arising from a single (or multiple processive) round(s) of recombination starting with an unknot, unlink, or (2,m)-torus knot or link substrate. We show that all knotted or linked products…
Recent studies classify the topology of proteins by analysing the distribution of their projections using knotoids. The approximation of this distribution depends on the number of projection directions that are sampled. Here we investigate…
We study kinetic transport through modular networks consisting of alternating domains using both analytical and numerical methods. We demonstrate that the mean velocity is insensitive to the local structure of the network, and it indicates…
Simple closed curves in the plane can be mapped to nontrivial knots under the action of origami foldings that allow the paper to self-intersect. We show all tame knot types may be produced in this manner, motivating the development of a new…
We study random knots, which we define as a triple of random periodic functions (where a random function is a random trigonometric series, \[f(\theta) = \sum_{k=1}^\infty a_k \cos (k \theta) +b_k (\sin k \theta),\] with $a_k, b_k$ are…
The motivation for this work was to construct a nontrivial knot with trivial Jones polynomial. Although that open problem has not yielded, the methods are useful for other problems in the theory of knot polynomials. The subject of the…
The ropelength of a knot or link is the minimal number of inches of 1-inch-thick rope that it takes to tie it. The relationship of this measurement to knot and link invariants has been studied by various authors. We give the first results…
In \cite{Kim} it is shown that knots in $S_{g} \times S^{1}$ can be presented by virtual diagrams with a decoration, so called, {\em double lines}. In this paper, we study the essential diagram for each knot in $S_{g} \times S^{1}$, which…
Knitted fabrics are two-dimensional-like structures formed by stitching one-dimensional yarn into three-dimensional curves. Plain stitch or stockinette stitch, one of the most fundamental knitting stitches, consists of periodic lattices of…
Large scale molecular dynamics simulations on graphic processing units (GPUs) are employed to study the scaling behavior of ring polymers with various topological constraints in melts. Typical sizes of rings containing $3_1$, $5_1$ knots…
We investigate several conjectures in geometric topology by assembling computer data obtained by studying weaving knots, a doubly infinite family $W(p,n)$ of examples of hyperbolic knots. In particular, we compute some important polynomial…