Related papers: Why A Large Scale Mode Can Be Essential For Unders…
The last decade has seen a significant increase in the number of studies devoted to wave turbulence. Many deal with water waves, as modeling of ocean waves has historically motivated the development of weak turbulence theory, which adresses…
A number of micro-scale biological flows are characterized by spatio-temporal chaos. These include dense suspensions of swimming bacteria, microtubule bundles driven by motor proteins, and dividing and migrating confluent layers of cells. A…
Bacteria can form a great variety of spatially heterogeneous cell density patterns, ranging from simple concentric rings to dynamical spiral waves appearing in growing colonies. These pattern formation phenomena are important as they…
Motile cilia are a striking example of functional cellular organelle, conserved across all the eukaryotic species. Motile cilia allow swimming of cells and small organisms and transport of liquids across epithelial tissues. Whilst the…
Cytoskeletal filaments transported by surface immobilized molecular motors with one end pinned to the surface have been observed to spiral in a myosin-driven actin 'gliding assay'. The radius of the spiral was shown to scale with motor…
We propose a coarse-grained theoretical model to capture the aging of microfluidic devices under different conditions including constant applied flow rate and constant applied pressure gradient. Microfluidic devices that sort cells by their…
In this work, we study in detail the distribution of stochastic forces generated by the molecular motors activity, in the actin cortex of pre-muscular cells. By combining active and passive rheology experiments, performed on the same…
Rotating turbulence is ubiquitous in nature. Previous works suggest that such turbulence could be described as an ensemble of interacting inertial waves across a wide range of length scales. For turbulence in macroscopic quantum…
Cell shape changes are largely controlled by the actin cytoskeleton, a dynamic filament network beneath the plasma membrane. Several cell types can form extended free-standing protrusions not supported by an extracellular substrate or…
The mechanism of propulsion of host bacteria under the action of actin gel networks is examined by means of a continuum model of the dynamics of F-actin concentration. The model includes the elasticity of the network, its attachment to the…
Magnetohydrodynamic (MHD) kink waves are ubiquitously observed in the solar atmosphere. The propagation and damping of these waves may play relevant roles for the transport and dissipation of energy in the solar atmospheric medium. However,…
Active control of spin-wave dynamics is demonstrated using broadband ferromagnetic resonance in two-dimensional Ni80Fe20 antidot lattices arranged in hexagonal lattice with fixed lattice constant but varying antidot diameter. A strong…
Actin is a globular protein which forms long filaments in the eukaryotic cytoskeleton, whose roles in cell function include structural support, contractile activity to intracellular signalling. We model actin filaments as two chains of…
The dynamics of entrainment of finite-size heavy particles in a turbulent open channel flow over a smooth surface are analyzed. Three types of simulations, namely with freely moving, rotation-constrained, and spanwise-motion-constrained…
Attention sinks and massive activations are recurring and closely related phenomena in Transformer models. Existing explanations have largely focused on the forward pass, yet in pre-norm Transformers, large residual-stream norms play only…
The symmetry breaking of the actin network from radial to longitudinal symmetry has been identified as the major mechanism for keratocytes (fish cells) motility on solid substrate. For strong friction coefficient, the two dimensional actin…
Wavelength selection in reaction--diffusion systems can be understood as a coarsening process that is interrupted by counteracting processes at certain wavelengths. We first show that coarsening in mass-conserving systems is driven by…
The growth of actin filament networks is a fundamental biological process that drives a variety of cellular and intracellular motions. During motility, eukaryotic cells and intracellular pathogens are propelled by actin networks organized…
An analytical theory is proposed for the kinetic electrostatic electron nonlinear (KEEN) waves originally found in simulations by Afeyan et al [arXiv:1210.8105]. We suggest that KEEN waves represent saturated states of the negative mass…
The spatial structure of the cell is highly organized at all levels: from small complexes and assemblies, to local nano- and micro-clusters, to global, micrometer scales across and between cells. We suggest that this multiscale spatial cell…