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Agent-based models have proven to be useful tools in supporting decision-making processes in different application domains. The advent of modern computers and supercomputers has enabled these bottom-up approaches to realistically model…

There are numerous scenarios in which populations of cells migrate in crowded environments. Typical examples include wound healing, cancer growth and embryo development. In these crowded environments cells are able to interact with each…

Cell Behavior · Quantitative Biology 2019-07-03 Christian A. Yates , George Chappelle

Infectious diseases are caused by pathogenic microorganisms and can spread through different ways. Mathematical models and computational simulation have been used extensively to investigate the transmission and spread of infectious…

Malaria is one of the most common mosquito-borne diseases widespread in tropical and subtropical regions, causing thousands of deaths every year in the world. In a previous paper, we formulated an age-structured model containing three…

Populations and Evolution · Quantitative Biology 2024-05-24 Quentin Richard , Marc Choisy , Ramsès Djidjou-Demasse , Thierry Lefèvre

This study investigates the spatial integration of agent-based models (ABMs) and compartmental models for infectious disease modeling, presenting a novel hybrid approach and examining its implications. ABMs offer detailed insights by…

Populations and Evolution · Quantitative Biology 2025-02-06 Inan Bostanci , Tim Conrad

Malaria is usually diagnosed by a microbiologist by examining a small sample of blood smear. Reducing mortality from malaria infection is possible if it is diagnosed early and followed with appropriate treatment. While the WHO has set…

Computer Vision and Pattern Recognition · Computer Science 2023-03-22 Onyekachukwu R. Okonji

Malaria remains a significant public health challenge in many regions, necessitating robust predictive models to aid in its management and prevention. This study focuses on developing and evaluating time series models for forecasting…

Applications · Statistics 2025-11-19 Sujit K. Ghosh , Usha Ananthakumar , Praveen D. Chougale , Adithya B. Somaraj

Stroke is one of the leading causes of death and disability worldwide but it is believed to be highly preventable. The majority of stroke prevention focuses on targeting high-risk individuals but its is important to understand how the…

Computers and Society · Computer Science 2024-07-24 Elizabeth Hunter , John D. Kelleher

We mapped current and future temperature suitability for malaria transmission in Africa using a published model that incorporates nonlinear physiological responses to temperature of the mosquito vector Anopheles gambiae and the malaria…

Quantitative Methods · Quantitative Biology 2016-05-13 Sadie J. Ryan , Amy McNally , Leah R. Johnson , Erin Mordecai , Tal Ben-Horin , Krijn Paaijmans , Kevin D. Lafferty

We review existing approaches to mathematical modeling and analysis of multi-agent systems in which complex collective behavior arises out of local interactions between many simple agents. Though the behavior of an individual agent can be…

Robotics · Computer Science 2007-05-23 Kristina Lerman , Aram Galstyan , Tad Hogg

A deterministic mathematical model is formulated and analyzed to study the transmission dynamics of Nipah virus both qualitatively and numerically. Existence and stability of equilibria were investigated and the model was rigorously…

Dynamical Systems · Mathematics 2020-10-09 BI Omede , PO Ameh , A Omame , B Bolaji

Disease spread in most biological populations requires the proximity of agents. In populations where the individuals have spatial mobility, the contact graph is generated by the "collision dynamics" of the agents, and thus the evolution of…

Physics and Society · Physics 2007-06-07 Z. Toroczkai , H. Guclu

This article explores mathematical models for understanding the evolution of contagious diseases. The most widely known set of models are the compartmental ones, which are based on a set of differential equations. But these are not the only…

Populations and Evolution · Quantitative Biology 2021-12-07 C. O. S. Sorzano

The analysis of contagion-diffusion processes in metapopulations is a powerful theoretical tool to study how mobility influences the spread of communicable diseases. Nevertheless, many metapopulation approaches use indistinguishable agents…

Physics and Society · Physics 2022-04-20 Pablo Valgañón , David Soriano-Paños , Alex Arenas , Jesús Gómez-Gardeñes

To represent the complex individual interactions in the dynamics of disease spread informed by data, the coupling of an epidemiological agent-based model with the ensemble Kalman filter is proposed. The statistical inference of the…

Applications · Statistics 2022-05-04 Tadeo Javier Cocucci , Manuel Pulido , Juan Aparicio , Juan Ruiz , Ignacio Simoy , Santiago Rosa

Mathematical models are formal and simplified representations of the knowledge related to a phenomenon. In classical epidemic models, a neglected aspect is the heterogeneity of disease transmission and progression linked to the viral load…

Physics and Society · Physics 2022-05-10 Rossella Della Marca , Nadia Loy , Andrea Tosin

Mathematical modelling has a long history in the context of collective cell migration, with applications throughout development, disease and regenerative medicine. The aim of modelling in this context is to provide a framework in which to…

Quantitative Methods · Quantitative Biology 2025-06-24 Ruth E. Baker , Rebecca M. Crossley , Carles Falco , Simon F. Martina-Perez

Molecular dynamics has been widely used to numerically solve equation of motion of classical many-particle system. It can be used to simulate many systems including biophysics, whose complexity level is determined by the involved elements.…

Biological Physics · Physics 2014-02-27 Luman Haris , Siti Nurul Khotimah , Freddy Haryanto , Sparisoma Viridi

We present a systematic review of some basic results on the derivation of classical epidemiological models from simple agent-based dynamics. The evolution of large populations is coupled with the dynamics of the contact distribution,…

Populations and Evolution · Quantitative Biology 2024-10-14 Mattia Zanella

Malaria is an infectious disease affecting a large population across the world, and interventions need to be efficiently applied to reduce the burden of malaria. We develop a framework to help policy-makers decide how to allocate limited…

Applications · Statistics 2020-03-12 Qian Guan , Brian J. Reich , Eric B. Laber