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Manifold-valued data naturally arises in medical imaging. In cognitive neuroscience, for instance, brain connectomes base the analysis of coactivation patterns between different brain regions on the analysis of the correlations of their…

Machine Learning · Statistics 2019-11-20 Nina Miolane , Susan Holmes

We introduce a data-driven dynamic factor framework for modeling the joint evolution of high-dimensional covariates and responses without parametric assumptions. Standard factor models applied to covariates alone often lose explanatory…

Machine Learning · Statistics 2026-01-16 Graeme Baker , Agostino Capponi , J. Antonio Sidaoui

Finding coarse-grained, low-dimensional descriptions is an important task in the analysis of complex, stochastic models of gene regulatory networks. This task involves (a) identifying observables that best describe the state of these…

Quantitative Methods · Quantitative Biology 2015-06-26 Radek Erban , Thomas A. Frewen , Xiao Wang , Timothy C. Elston , Ronald Coifman , Boaz Nadler , Ioannis G. Kevrekidis

Data-driven models based on deep learning algorithms intend to overcome the limitations of traditional constitutive modelling by directly learning from data. However, the need for extensive data that collate the full state of the material…

Materials Science · Physics 2023-12-27 Filippo Masi , Itai Einav

Multiscale stochastic dynamical systems have been widely adopted to a variety of scientific and engineering problems due to their capability of depicting complex phenomena in many real world applications. This work is devoted to…

Machine Learning · Statistics 2024-01-02 Lingyu Feng , Ting Gao , Min Dai , Jinqiao Duan

Coarse-graining offers a means to extend the achievable time and length scales of molecular dynamics simulations beyond what is practically possible in the atomistic regime. Sampling molecular configurations of interest can be done…

Computational Physics · Physics 2022-11-30 Kirill Shmilovich , Marc Stieffenhofer , Nicholas E. Charron , Moritz Hoffmann

We propose and illustrate an approach to coarse-graining the dynamics of evolving networks (networks whose connectivity changes dynamically). The approach is based on the equation-free framework: short bursts of detailed network evolution…

Social and Information Networks · Computer Science 2012-02-28 Katherine A. Bold , Karthikeyan Rajendran , Balázs Ráth , Ioannis G. Kevrekidis

We present a method of discovering governing differential equations from data without the need to specify a priori the terms to appear in the equation. The input to our method is a dataset (or ensemble of datasets) corresponding to a…

Computational Engineering, Finance, and Science · Computer Science 2019-11-12 Steven Atkinson , Waad Subber , Liping Wang , Genghis Khan , Philippe Hawi , Roger Ghanem

Features in machine learning problems are often time-varying and may be related to outputs in an algebraic or dynamical manner. The dynamic nature of these machine learning problems renders current higher order accelerated gradient descent…

Optimization and Control · Mathematics 2019-05-29 Joseph E. Gaudio , Travis E. Gibson , Anuradha M. Annaswamy , Michael A. Bolender

Neural ordinary differential equations (NODE) have garnered significant attention for their design of continuous-depth neural networks and the ability to learn data/feature dynamics. However, for high-dimensional systems, estimating…

Machine Learning · Computer Science 2025-10-07 Muhao Guo , Haoran Li , Yang Weng

Conventional gradient descent methods compute the gradients for multiple variables through the partial derivative. Treating the coupled variables independently while ignoring the interaction, however, leads to an insufficient optimization…

Machine Learning · Computer Science 2021-06-22 Runqi Wang , Baochang Zhang , Li'an Zhuo , Qixiang Ye , David Doermann

The accurate simulation of complex dynamics in fluid flows demands a substantial number of degrees of freedom, i.e. a high-dimensional state space. Nevertheless, the swift attenuation of small-scale perturbations due to viscous diffusion…

Fluid Dynamics · Physics 2024-11-20 C. Ricardo Constante-Amores , Michael D. Graham

Simulations of chaotic systems can only produce high-fidelity trajectories if the initial and boundary conditions are well specified. When these conditions are unknown but measurements are available, variational state estimation can…

Dynamical Systems · Mathematics 2026-05-29 Noah B. Frank , Joshua L. Pughe-Sanford , Samuel J. Grauer

The activity of collections of synchronizing neurons can be represented by weakly coupled nonlinear phase oscillators satisfying Kuramoto's equations. In this article, we build such neural-oscillator models, partly based on…

Neurons and Cognition · Quantitative Biology 2012-04-27 Patrick Suppes , Jose Acacio de Barros , Gary Oas

Advances in machine learning have revolutionized capabilities in applications ranging from natural language processing to marketing to health care. Here, we demonstrate the efficacy of machine learning in predicting chaotic behavior in…

Soft Condensed Matter · Physics 2020-02-28 Hiromi Yasuda , Koshiro Yamaguchi , Yasuhiro Miyazawa , Richard Wiebe , Jordan R. Raney , Jinkyu Yang

We propose a novel approach for change-point detection and parameter learning in multivariate non-stationary time series exhibiting oscillatory behaviour. We approximate the process through a piecewise function defined by a sum of…

Methodology · Statistics 2026-02-02 Nicolas Bianco , Lorenzo Cappello

Bayesian inference is a powerful tool for parameter estimation and uncertainty quantification in dynamical systems. However, for nonlinear oscillator networks such as Kuramoto models, widely used to study synchronization phenomena in…

Applications · Statistics 2026-03-24 Emma Hannula , Jana de Wiljes , Matthew T. Moores , Heikki Haario , Lassi Roininen

In recent years, deep learning has proven to be a viable methodology for surrogate modeling and uncertainty quantification for a vast number of physical systems. However, in their traditional form, such models can require a large amount of…

Computational Physics · Physics 2019-12-04 Nicholas Geneva , Nicholas Zabaras

Harnessing data to discover the underlying governing laws or equations that describe the behavior of complex physical systems can significantly advance our modeling, simulation and understanding of such systems in various science and…

Machine Learning · Computer Science 2021-11-17 Zhao Chen , Yang Liu , Hao Sun

We study a generalized Kuramoto model in which each oscillator carries two coupled phase variables, representing a minimal swarmalator system. Assuming perfect correlation between the intrinsic frequencies associated with each phase…

Statistical Mechanics · Physics 2025-11-12 Hyunsuk Hong , Jae Sung Lee , Hyunggyu Park