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The diffusion of a reactant to a binding target plays a key role in many biological processes. The reaction-radius at which the reactant and target may interact is often a small parameter relative to the diameter of the domain in which the…

Subcellular Processes · Quantitative Biology 2016-10-26 Sam Isaacson , Ava Mauro , Jay Newby

The time-fractional Fokker-Planck equation is a key model for characterizing anomalous diffusion, stochastic transport, and non-equilibrium statistical mechanics with applications in finance, chaotic dynamics, optical physics, and…

Numerical Analysis · Mathematics 2026-01-28 Neetu Garg , Varsha R

For a gas-solid interfacial system where chemical species undergo reversible adsorption, we develop a mesoscopic stochastic modeling method that simulates both gas-phase hydrodynamics and surface coverage dynamics by coupling the Langmuir…

Problems involving the capture of a moving entity by a trap occur in a variety of physical situations, the moving entity being an electron, an excitation, an atom, a molecule, a biological object such as a receptor cluster, a cell, or even…

Statistical Mechanics · Physics 2015-06-17 K. Spendier , S. Sugaya , V. M. Kenkre

In this paper, a mathematical model is developed to describe the evolution of the concentration of compounds through a gas chromatography column. The model couples mass balances and kinetic equations for all components. Both single and…

Computational Engineering, Finance, and Science · Computer Science 2025-01-03 A. Cabrera-Codony , A. Valverde , K. Born , O. A. I. Noreldin , T. G. Myers

We consider a reaction-diffusion process with retardation. The particles, immersed in traps initially, remain inactive until another particle is annihilated spontaneously with a rate $\lambda$ at a certain point $\vec x$. In that case the…

Statistical Mechanics · Physics 2015-06-25 Michael Schulz , Steffen Trimper , Knud Zabrocki

Background. The calculation of diffusion-controlled ligand binding rates is important for understanding enzyme mechanisms as well as designing enzyme inhibitors. We demonstrate the accuracy and effectiveness of a Lagrangian particle-based…

Biomolecules · Quantitative Biology 2016-05-17 Wenxiao Pan , Michael Daily , Nathan A. Baker

This article is devoted to Feller's diffusion equation which arises naturally in probabilities and physics (e.g. wave turbulence theory). If discretized naively, this equation may represent serious numerical difficulties since the diffusion…

Analysis of PDEs · Mathematics 2020-05-26 Denys Dutykh

Non-equilibrium radiation diffusion is an important mechanism of energy transport in Inertial Confinement Fusion, astrophysical plasmas, furnaces and heat exchangers. In this paper, an analytical solution to the non-equilibrium Marshak…

Mathematical Physics · Physics 2013-01-17 Karabi Ghosh

We investigate three different methods to tackle the problem of diffusion-limited reactions (annihilation) of hard-core classical particles in one dimension. We first extend an approach devised by Lushnikov and calculate for a single…

Statistical Mechanics · Physics 2009-10-31 Pierre-Antoine Bares , Mauro Mobilia

An analytical solution based on a diffuse interface model is presented for an isothermal evaporation problem under sub-saturation pressure. The macroscopic equations are derived from the free-energy method, widely recognized in the lattice…

In this paper we present a mathematical model for the electrochemical deposition aimed at the production of inverse opals. The real system consists of an arrangement of sub micrometer spheres, through which the species in an electrolytic…

Chemical Physics · Physics 2013-06-25 P. C. T. D'Ajello , L. Lauck , G. L. Nunes

We study global existence, uniqueness and positivity of weak solutions of a class of reaction-diffusion systems of chemical kinetics type, under the assumptions of logarithmic Sobolev inequality and appropriate exponential integrability of…

Probability · Mathematics 2014-05-07 Pierre Fougères , Ivan Gentil , Boguslaw Zegarlinski

The reaction-diffusion equation is one of the cornerstones equations in applied science and engineering. In the present study, a deep neural network has been trained in order to predict the solution of the equation with different…

Machine Learning · Computer Science 2019-12-12 Amin Karimi Monsefi , Rana Bakhtiyarzade

In this paper, we focus on designing a well-conditioned Glarkin spectral methods for solving a two-sided fractional diffusion equations with drift, in which the fractional operators are defined neither in Riemann-Liouville nor Caputo sense,…

Numerical Analysis · Mathematics 2019-09-13 Lijing Zhao , Xudong Wang

We consider a scalar reaction-diffusion equation in one spatial dimension with bistable nonlinearity and a nonlocal space-fractional diffusion operator of Riesz-Feller type. We present our analytical results on the existence, uniqueness (up…

Numerical Analysis · Mathematics 2017-02-28 Franz Achleitner , Christian Kuehn

Critical points of energy functionals, which are of broad interest, for instance, in physics and chemistry, in solid and quantum mechanics, in material science, or in general diffusion-reaction models arise as solutions to the associated…

Numerical Analysis · Mathematics 2025-10-20 Pascal Heid , Thomas P. Wihler

In this paper we study the randomized non-autonomous complete linear differential equation. The diffusion coefficient and the source term in the differential equation are assumed to be stochastic processes and the initial condition is…

Probability · Mathematics 2018-02-13 J. Catatayud , J. -C. Cortes , M. Jornet

In this work the explicit solution of the electronic plasma diffusion with radiation reaction force, under the action of an exponential decay external electric field is given. The electron dynamics is described by a classical generalized…

Kramers escape from a metastable state in the presence of both thermal and quantum fluctuations under strong damping is treated as a thermally activated process in a quantum modified semiclassical potential. Dirac's time-dependent…

Quantum Physics · Physics 2025-07-15 Choon-Lin Ho