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Sparse Autoencoders (SAEs) have shown promise in improving the interpretability of neural network activations, but can learn features that are not features of the input, limiting their effectiveness. We propose \textsc{Mutual Feature…

Machine Learning · Computer Science 2024-11-07 Luke Marks , Alasdair Paren , David Krueger , Fazl Barez

Gene expression represents a fundamental interface between genes and environment in the development and ongoing plasticity of the human organism. Individual differences in gene expression are likely to underpin much of human diversity,…

Genomics · Quantitative Biology 2019-05-31 Akram Yazdani , Raul Mendez Giraldez , Ahmad Samiei

Physiological and behavioral data collected from wearable or mobile sensors have been used to estimate self-reported stress levels. Since the stress annotation usually relies on self-reports during the study, a limited amount of labeled…

Signal Processing · Electrical Eng. & Systems 2022-03-01 Han Yu , Akane Sano

Instruction tuning data are often quantity-saturated due to the large volume of data collection and fast model iteration, leaving data selection important but underexplored. Existing quality-driven data selection methods, such as LIMA…

Computation and Language · Computer Science 2025-04-02 Xianjun Yang , Shaoliang Nie , Lijuan Liu , Suchin Gururangan , Ujjwal Karn , Rui Hou , Madian Khabsa , Yuning Mao

Automated seizure detection and classification from electroencephalography (EEG) can greatly improve seizure diagnosis and treatment. However, several modeling challenges remain unaddressed in prior automated seizure detection and…

Signal Processing · Electrical Eng. & Systems 2022-03-15 Siyi Tang , Jared A. Dunnmon , Khaled Saab , Xuan Zhang , Qianying Huang , Florian Dubost , Daniel L. Rubin , Christopher Lee-Messer

Sparse autoencoders (SAEs) are used to decompose neural network activations into sparsely activating features, but many SAE features are only interpretable at high activation strengths. To address this issue we propose to use binary sparse…

Machine Learning · Computer Science 2025-10-01 Lucia Quirke , Stepan Shabalin , Nora Belrose

Variational autoencoders (VAEs) have been used extensively to discover low-dimensional latent factors governing neural activity and animal behavior. However, without careful model selection, the uncovered latent factors may reflect noise in…

Machine Learning · Computer Science 2023-12-13 Julia Huiming Wang , Dexter Tsin , Tatiana Engel

Recognizing emotions using few attribute dimensions such as arousal, valence and dominance provides the flexibility to effectively represent complex range of emotional behaviors. Conventional methods to learn these emotional descriptors…

Audio and Speech Processing · Electrical Eng. & Systems 2023-05-15 Srinivas Parthasarathy , Carlos Busso

Estimation of Distribution Algorithms (EDAs) require flexible probability models that can be efficiently learned and sampled. Autoencoders (AE) are generative stochastic networks with these desired properties. We integrate a special type of…

Neural and Evolutionary Computing · Computer Science 2015-09-22 Malte Probst

Autoencoder can give rise to an appropriate latent representation of the input data, however, the representation which is solely based on the intrinsic property of the input data, is usually inferior to express some semantic information. A…

Machine Learning · Computer Science 2022-06-01 Yurui Ming , Cuihuan Du , Chin-Teng Lin

The firing dynamics of biological neurons in mathematical models is often determined by the model's parameters, representing the neurons' underlying properties. The parameter estimation problem seeks to recover those parameters of a single…

Neurons and Cognition · Quantitative Biology 2022-10-05 Long Le , Yao Li

Cognitive load, the amount of mental effort required for task completion, plays an important role in performance and decision-making outcomes, making its classification and analysis essential in various sensitive domains. In this paper, we…

Machine Learning · Computer Science 2023-08-02 Dustin Pulver , Prithila Angkan , Paul Hungler , Ali Etemad

Brain MRI foundation models learn rich representations of anatomy, but interpreting what clinical information they encode remains an open problem. Standard sparse autoencoders (SAEs) suffer from severe feature collapse in deep transformer…

Computer Vision and Pattern Recognition · Computer Science 2026-05-05 Favour Nerrise , Lucy Yin , Mohammad H. Abbasi , Kilian M. Pohl , Ehsan Adeli

One of the most important challenges in the analysis of high-throughput genetic data is the development of efficient computational methods to identify statistically significant Single Nucleotide Polymorphisms (SNPs). Genome-wide association…

The aetiology of polygenic obesity is multifactorial, which indicates that life-style and environmental factors may influence multiples genes to aggravate this disorder. Several low-risk single nucleotide polymorphisms (SNPs) have been…

Genomics · Quantitative Biology 2018-08-27 Casimiro A. Curbelo Montañez , Paul Fergus , Carl Chalmers , Jade Hind

Stress has emerged as a critical global health issue, contributing to cardiovascular disorders, depression, and several other long-term illnesses. Consequently, accurate and reliable stress monitoring systems are of growing importance. In…

Signal Processing · Electrical Eng. & Systems 2025-09-03 Md. Mohibbul Haque Chowdhury , Nafisa Anjum , Md. Rokonuzzaman Mim

Despite the increasing research interest in end-to-end learning systems for speech emotion recognition, conventional systems either suffer from the overfitting due in part to the limited training data, or do not explicitly consider the…

Computation and Language · Computer Science 2019-04-01 Zixing Zhang , Bingwen Wu , Bjoern Schuller

Chinese characters carry a wealth of morphological and semantic information; therefore, the semantic enhancement of the morphology of Chinese characters has drawn significant attention. The previous methods were intended to directly extract…

Computer Vision and Pattern Recognition · Computer Science 2022-07-19 Zongze Chen , Wenxia Yang , Xin Li

Single subject prediction of brain disorders from neuroimaging data has gained increasing attention in recent years. Yet, for some heterogeneous disorders such as major depression disorder (MDD) and autism spectrum disorder (ASD), the…

Machine Learning · Computer Science 2022-06-08 Ahmed El Gazzar , Rajat Mani Thomas , Guido Van Wingen

The complex and unique neural network topology of the human brain formed through natural evolution enables it to perform multiple cognitive functions simultaneously. Automated evolutionary mechanisms of biological network structure inspire…

Neural and Evolutionary Computing · Computer Science 2023-09-12 Wenxuan Pan , Feifei Zhao , Zhuoya Zhao , Yi Zeng