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Motivated by a proposed olfactory mechanism based on a vibrationally-activated molecular switch, we study electron transport within a donor-acceptor pair that is coupled to a vibrational mode and embedded in a surrounding environment. We…

Mesoscale and Nanoscale Physics · Physics 2015-02-12 Agata Checinska , Felix A. Pollock , Libby Heaney , Ahsan Nazir

A novel method is introduced in order to treat the dissipative dynamics of quantum systems interacting with a bath of classical degrees of freedom. The method is based upon an extension of the Nos\`e-Hoover chain (constant temperature)…

Quantum Physics · Physics 2009-11-13 Alessandro Sergi

Statistical mechanics is a powerful framework for analyzing optimization yielding analytical results for matching, optimal transport, and other combinatorial problems. However, these methods typically target the zero-temperature limit,…

Statistical Mechanics · Physics 2026-02-18 Riccardo Piombo , Lorenzo Buffa , Dario Mazzilli , Aurelio Patelli

We introduce, analyze and test a new interpolation operator for use with continuous data assimilation (DA) of evolution equations that are discretized spatially with the finite element method. The interpolant is constructed as an…

Analysis of PDEs · Mathematics 2018-10-09 Leo G. Rebholz , Camille Zerfas

Data assimilation (DA) is a fundamental computational technique that integrates numerical simulation models and observation data on the basis of Bayesian statistics. Originally developed for meteorology, especially weather forecasting, DA…

We introduce an encoder-only approach to learn the evolution operators of large-scale non-linear dynamical systems, such as those describing complex natural phenomena. Evolution operators are particularly well-suited for analyzing systems…

Machine Learning · Computer Science 2025-05-27 Giacomo Turri , Luigi Bonati , Kai Zhu , Massimiliano Pontil , Pietro Novelli

In dispersive media, dissipation appears in the Schr\"odinger representation of classical Maxwell equations as a sparse diagonal operator occupying an $r$-dimensional subspace. A first order Suzuki-Trotter approximation for the evolution…

Quantum Physics · Physics 2024-05-22 Efstratios Koukoutsis , Kyriakos Hizanidis , Abhay K. Ram , George Vahala

Data assimilation is a technique for increasing the accuracy of simulations of solutions to partial differential equations by incorporating observable data into the solution as time evolves. Recently, a promising new algorithm for data…

Analysis of PDEs · Mathematics 2018-12-06 Adam Larios , Collin Victor

Differential equations based on physical principals are used to represent complex dynamic systems in all fields of science and engineering. Through repeated use in both academics and industry, these equations have been shown to represent…

Methodology · Statistics 2022-09-08 Joshua S. North , Christopher K. Wikle , Erin M. Schliep

Out-of-distribution (OOD) detection holds significant importance across many applications. While semantic and domain-shift OOD problems are well-studied, this work focuses on covariate shifts - subtle variations in the data distribution…

Computer Vision and Pattern Recognition · Computer Science 2026-01-28 Francisco Caetano , Christiaan Viviers , Luis A. Zavala-Mondragón , Peter H. N. de With , Fons van der Sommen

First, two examples of 1D distributed port-Hamiltonian systems with dissipation, given in explicit (descriptor) form, are considered: the Dzekster model for the seepage of underground water and a nanorod model with non-local viscous…

Dynamical Systems · Mathematics 2024-02-13 Antoine Bendimerad-Hohl , Denis Matignon , Ghislain Haine , Laurent Lefèvre

This paper provides an in-depth analysis on how different aspects of the dynamic operating envelope (DOE) formulation impact the computation and allocation of network capacity. We show that the envelopes are significantly affected by the…

Systems and Control · Electrical Eng. & Systems 2026-05-11 Wilhiam de Carvalho , Florin Capitanescu , Cyril Rasic , Jean-François Toubeau , François Vallée

Near-term prediction of the structured spatio-temporal processes driving our climate is of profound importance to the safety and well-being of millions, but the prounced nonlinear convection of these processes make a complete mechanistic…

Computational Physics · Physics 2020-06-30 Daniel J. Tait

The Koopman and Perron Frobenius transport operators are fundamentally changing how we approach dynamical systems, providing linear representations for even strongly nonlinear dynamics. Although there is tremendous potential benefit of such…

Dynamical Systems · Mathematics 2019-02-28 Eurika Kaiser , J. Nathan Kutz , Steven L. Brunton

Kinetic simulations excel at capturing microscale plasma physics phenomena with high accuracy, but their computational demands make them impractical for modeling large-scale space and astrophysical systems. In this context, we build a…

Plasma Physics · Physics 2025-09-05 Simin Shekarpaz , Chuanfei Dong , Ziyu Huang

A model system for classical fluids out of equilibrium, referred to as DPD solid (Dissipative Particles Dynamics), is studied by analytical and simulation methods. The time evolution of a DPD particle is described by a fluctuating heat…

Statistical Mechanics · Physics 2009-11-10 Marisol Ripoll , Matthieu H. Ernst

Analytical models were developed that simulate stable isotope ratios of volatile organic compounds (VOCs) near a point source contamination in the unsaturated zone. The models describe diffusive transport of VOCs, biodegradation and source…

Chemical Physics · Physics 2011-09-15 D. Bouchard , F. Cornaton , P. Höhener , D. Hunkeler

Developing neural operators that accurately predict the behavior of systems governed by partial differential equations (PDEs) across unseen parameter regimes is crucial for robust generalization in scientific and engineering applications.…

Machine Learning · Computer Science 2026-04-21 Eva van Tegelen , Taniya Kapoor , George A. K. van Voorn , Peter van Heijster , Ioannis N. Athanasiadis

In this article we develop an algorithm for the efficient simulation of electrolytes in the presence of physical boundaries. In previous work the Discrete Ion Stochastic Continuum Overdamped Solvent (DISCOS) algorithm was derived for triply…

In reservoir simulation, solution of the coupled systems of nonlinear algebraic equations that are associated with fully-implicit (backward Euler) discretization is challenging. Having a robust and efficient nonlinear solver is necessary in…

Computational Physics · Physics 2020-09-02 Jiamin Jiang , Hamdi A. Tchelepi