Related papers: QuASeR -- Quantum Accelerated De Novo DNA Sequence…
DNA constructs and their annotated sequence maps have been rapidly accumulating with the advancement of DNA cloning, synthesis, and assembly methods. Such a resource has the potential to be optimally utilized in an autonomous DNA building…
Deploying quantum machine learning algorithms on near-term quantum hardware requires circuits that respect device-specific gate sets, connectivity constraints, and noise characteristics. We present a hardware-aware Neural Architecture…
Haplotype phasing, the process of resolving parental allele inheritance patterns in diploid genomes, is critical for precision medicine and population genetics, yet the underlying optimization is NP-hard, posing a scalability challenge. To…
Traditionally, we usually utilize the method of shotgun to cut a DNA sequence into pieces and we have to reconstruct the original DNA sequence from the pieces, those are widely used method for DNA assembly. Emerging DNA sequence…
Autoencoders are fundamental tools in classical computing for unsupervised feature extraction, dimensionality reduction, and generative learning. The Quantum Autoencoder (QAE), introduced by Romero J.[2017 Quantum Sci. Technol. 2 045001],…
Genome sequence analysis plays a pivotal role in enabling many medical and scientific advancements in personalized medicine, outbreak tracing, and forensics. However, the analysis of genome sequencing data is currently bottlenecked by the…
This paper presents the definition and implementation of a quantum computer architecture to enable creating a new computational device - a quantum computer as an accelerator In this paper, we present explicitly the idea of a quantum…
This paper presents the implementation of a quantum sequence alignment (QSA) algorithm on biological data in environments simulating noisy intermediate-scale quantum (NISQ) computers. The approach to quantum bioinformatics adapts the…
Exploiting the properties of quantum information to the benefit of machine learning models is perhaps the most active field of research in quantum computation. This interest has supported the development of a multitude of software…
Digital quantum computing promises to offer computational capabilities beyond the reach of classical systems, yet its capabilities are often challenged by scarce quantum resources. A critical bottleneck in this context is how to load…
Quantum error-correcting codes (QECCs) can eliminate the negative effects of quantum noise, the major obstacle to the execution of quantum algorithms. However, realizing practical quantum error correction (QEC) requires resolving many…
The quest for effective quantum feature maps for data encoding presents significant challenges, particularly due to the flat training landscapes and lengthy training processes associated with parameterised quantum circuits. To address these…
We instantiate the quantum reservoir autoencoder (QRA) with a noise-induced reservoir employing reset noise channels and address two open problems: noise-resilient reversibility and blind decryption. For a single-ciphertext protocol with 10…
Using a dissipative quantum neural network (DQNN) accompanied by conjugate layers, we upgrade the performance of the existing quantum auto-encoder (QAE) network as a quantum denoiser of a noisy m-qubit GHZ state. Our new denoising…
While the prominent quantum computing architectures are based on superconducting technology, new quantum hardware technologies are emerging, such as Trapped Ions, Neutral Atoms (or FPQAs), Silicon Spin Qubits, etc. This diverse set of…
Quantum annealing is an emerging metaheuristic used for solving combinatorial optimisation problems. However, hardware based physical quantum annealers are primarily limited to a single vendor. As an alternative, we can discretise the…
Quantum reservoir computing exploits fixed quantum dynamics and a trainable linear readout to process temporal data, yet reversing the transformation -- reconstructing the input from the reservoir output -- has been considered intractable…
Speculative Decoding (SD) has emerged as a premier technique for accelerating Large Language Model (LLM) inference by decoupling token generation into rapid drafting and parallel verification. While recent advancements in self-speculation…
Quantum architecture search (QAS) is the process of automating architecture engineering of quantum circuits. It has been desired to construct a powerful and general QAS platform which can significantly accelerate current efforts to identify…
This paper introduces QuSAnn v1.2 and Multiplexor Expander v1.2, two Java applications available for free. (Source code included in the distribution.) QuSAnn is a "code generator" for quantum simulated annealing: after the user inputs some…