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A consensus-based optimization (CBO) algorithm, which enables derivative and mesh-free optimization, is presented to localize a bioluminescent source. The light propagation is modeled by the radiative transfer equation approximated by…

Quantitative Methods · Quantitative Biology 2024-11-04 Jan Friedrich , Sarah Schraven , Fabian Kiessling , Michael Herty

Fractional-order dynamical networks are increasingly being used to model and describe processes demonstrating long-term memory or complex interlaced dependencies amongst the spatial and temporal components of a wide variety of dynamical…

Optimization and Control · Mathematics 2021-08-04 Sarthak Chatterjee , Andrea Alessandretti , A. Pedro Aguiar , Sérgio Pequito

Diffusion tensor imaging (DTI) plays a key role in analyzing the physical structures of biological tissues, particularly in reconstructing fiber tracts of the human brain in vivo. On the one hand, eigenvalues of diffusion tensors (DTs)…

Applications · Statistics 2013-04-18 Tao Yu , Chunming Zhang , Andrew L. Alexander , Richard J. Davidson

Optical coherence tomography (OCT) is a powerful and noninvasive method for retinal imaging. In this paper, we introduce a fast segmentation method based on a new variant of spectral graph theory named diffusion maps. The research is…

Computer Vision and Pattern Recognition · Computer Science 2012-10-09 Raheleh Kafieh , Hossein Rabbani , Michael D. Abramoff , Milan Sonka

Federated learning has attracted increasing attention with the emergence of distributed data. While extensive federated learning algorithms have been proposed for the non-convex distributed problem, federated learning in practice still…

Machine Learning · Computer Science 2023-03-10 Xidong Wu , Feihu Huang , Zhengmian Hu , Heng Huang

Diffusion MRI (dMRI) is a unique imaging technique for in vivo characterization of tissue microstructure and white matter pathways. However, its relatively long acquisition time implies greater motion artifacts when imaging, for example,…

Medical Physics · Physics 2020-02-26 Yoonmi Hong , Wei-Tang Chang , Geng Chen , Ye Wu , Weili Lin , Dinggang Shen , Pew-Thian Yap

Brain connectomics is still largely dominated by pairwise-based models, such as graphs, which cannot represent circulatory or higher-order functional interactions. In this paper, we propose a multimodal framework based on Topological Signal…

Neurons and Cognition · Quantitative Biology 2026-04-01 Breno C. Bispo , Stefania Sardellitti , Juliano B. Lima , Fernando A. N. Santos

Purpose: Oscillating gradient spin-echo (OGSE) diffusion MRI provides information about the microstructure of biological tissues via the frequency dependence of the apparent diffusion coefficient (ADC). ADC dependence on OGSE frequency has…

Medical Physics · Physics 2019-09-26 Aidin Arbabi , Jason Kai , Ali R Khan , Corey A Baron

In this paper, we propose a practical adaptive coding modulation scheme to approach the capacity of free-space optical (FSO) channels with intensity modulation/direct detection based on probabilistic shaping. The encoder efficiently adapts…

Information Theory · Computer Science 2020-12-01 Ahmed Elzanaty , Mohamed-Slim Alouini

According to the 2021 World Health Organization (WHO) Classification scheme for gliomas, glioma segmentation is a very important basis for diagnosis and genotype prediction. In general, 3D multimodal brain MRI is an effective diagnostic…

Image and Video Processing · Electrical Eng. & Systems 2025-06-23 Xiaoyu Shi , Shurong Chai , Yinhao Li , Jingliang Cheng , Jie Bai , Guohua Zhao , Yen-Wei Chen

Recent years have witnessed the tremendous development of fusing fiber-optic imaging with supervised deep learning to enable high-quality imaging of hard-to-reach areas. Nevertheless, the supervised deep learning method imposes strict…

A novel approach is presented for group statistical analysis of diffusion weighted MRI datasets through voxelwise Orientation Distribution Functions (ODF). Recent advances in MRI acquisition make it possible to use high quality diffusion…

Medical Physics · Physics 2019-05-13 Steven H. Baete , Jingyun Chen , Ying-Chia Lin , Xiuyuan Wang , Ricardo Otazo , Fernando E. Boada

Large displacement optical flow is an integral part of many computer vision tasks. Variational optical flow techniques based on a coarse-to-fine scheme interpolate sparse matches and locally optimize an energy model conditioned on colour,…

Computer Vision and Pattern Recognition · Computer Science 2022-06-28 Qiao Chen , Charalambos Poullis

In this paper, we propose a novel learning based method for automated segmenta-tion of brain tumor in multimodal MRI images. The machine learned features from fully convolutional neural network (FCN) and hand-designed texton fea-tures are…

Computer Vision and Pattern Recognition · Computer Science 2017-04-27 Mohammadreza Soltaninejad , Lei Zhang , Tryphon Lambrou , Nigel Allinson , Xujiong Ye

Optical time-domain reflectometry (OTDR) is the basis for distributed time-domain optical fiber sensing techniques. By injecting pulse light into an optical fiber, the distance information of an event can be obtained based on the time of…

Signal Processing · Electrical Eng. & Systems 2022-03-18 Hao Wu , Ming Tang

Dispersion curves characterize the frequency dependence of the phase and the group velocities of propagating elastic waves. Many analytical and numerical techniques produce dispersion curves from physics-based models. However, it is often…

Data Analysis, Statistics and Probability · Physics 2021-10-26 V. V. N. Sriram Malladi , Mohammad I. Albakri , Manu Krishnan , Serkan Gugercin , Pablo A. Tarazaga

High-frequency oscillations (HFOs) are a new biomarker for identifying the epileptogenic zone. Mapping HFO-generating regions can improve the precision of resection sites in patients with refractory epilepsy. However, detecting HFOs remains…

Computer Vision and Pattern Recognition · Computer Science 2025-10-13 Mostafa Mohammadpour , Mehdi Zekriyapanah Gashti , Yusif S. Gasimov

In this study, we proposed and validated a multi-atlas guided 3D fully convolutional network (FCN) ensemble model (M-FCN) for segmenting brain regions of interest (ROIs) from structural magnetic resonance images (MRIs). One major limitation…

Computer Vision and Pattern Recognition · Computer Science 2023-08-11 Jiong Wu , Xiaoying Tang

In this paper, we investigate distributed inference schemes, over binary-valued Markov random fields, which are realized by the belief propagation (BP) algorithm. We first show that a decision variable obtained by the BP algorithm in a…

Information Theory · Computer Science 2019-09-19 Younes Abdi , Tapani Ristaniemi

Estimating brain effective connectivity (EC) from functional magnetic resonance imaging (fMRI) data can aid in comprehending the neural mechanisms underlying human behavior and cognition, providing a foundation for disease diagnosis.…

Machine Learning · Computer Science 2025-03-17 Wen Xiong , Jinduo Liu , Junzhong Ji , Fenglong Ma