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We discuss the implementation of Bayesian inversion methods in order to recover the properties of the intergalactic medium from observations of the neutral hydrogen Lyman-$\alpha$ absorptions observed in the spectra of high redshift quasars…
The Ly$\alpha$ forest provides one of the best means of mapping large-scale structure at high redshift, including our tightest constraint on the distance-redshift relation before cosmic noon. We describe how the large-scale correlations in…
We measure the imprint of primordial baryon acoustic oscillations (BAO) in the correlation function of Ly$\alpha$ absorption in quasar spectra from the Baryon Oscillation Spectroscopic Survey (BOSS) and the extended BOSS (eBOSS) in Data…
We present a model for spectrophotometric calibration errors in observations of quasars from the third generation of the Sloan Digital Sky Survey (SDSS-III) Baryon Oscillation Spectroscopic Survey (BOSS) and describe the correction…
We present a method to make predictions with sets of correlated data values, in this case QSO flux spectra. We predict the continuum in the Lyman-Alpha forest of a QSO, from 1020 -- 1216 A, using the spectrum of that QSO from 1216 -- 1600 A…
(Abridged) We investigate the importance of several numerical artifacts such as lack of resolution on spectral properties of the Lyman alpha forest as computed from cosmological hydrodynamic simulations in a standard cold dark matter…
This article introduces a flexible and adaptive nonparametric method for estimating the association between multiple covariates and power spectra of multiple time series. The proposed approach uses a Bayesian sum of trees model to capture…
We forecast the prospects for cross-correlating future line intensity mapping (LIM) surveys with the current and future Ly-$\alpha$ forest data. We use large cosmological hydrodynamic simulations to model the expected emission signal for…
We compare two state-of-the-art numerical codes to study the overall accuracy in modeling the intergalactic medium and reproducing Lyman-$\alpha$ forest observables for DESI and high-resolution data sets. The codes employ different…
We measure the effective optical depth in the Lyman-alpha (Ly$\alpha$) forest using 40,035 quasar spectra from the Twelfth Data Release (DR12) of the Baryon Oscillation Spectroscopic Survey (BOSS) of SDSS-IV. A rigorous selection based on…
We present a new technique for detecting structure on Mpc scales in the Lyman-alpha forest. The technique is easy to apply in practice since it does not involve absorption line fitting but is rather based on the statistics of the…
We present the large-scale 3-point correlation function (3PCF) of the SDSS DR12 CMASS sample of $777,202$ Luminous Red Galaxies, the largest-ever sample used for a 3PCF or bispectrum measurement. We make the first high-significance…
The analysis of the Lyman-alpha forest of absorption lines in quasar spectra has emerged as a potentially powerful technique to constrain the linear matter power spectrum. In most previous work, the amplitude of the ionizing background was…
Measurements of the Ly$\alpha$ forest based on large numbers of quasar spectra from sky surveys such as SDSS/eBOSS accurately probe the distribution of matter on small scales and thus provide important constraints on several ingredients of…
The baryon-acoustic oscillation (BAO) feature in the Lyman-$\alpha$ forest is one of the key probes of the cosmic expansion rate at redshifts z~2.5, well before dark energy is believed to have become dynamically significant. A key advantage…
The distribution of absorption lines in the spectra of distant quasars, called the Lyman-$\alpha$ (Ly-$\alpha$) forest, is a unique probe of cosmology and the intergalactic medium at high redshifts and small scales. The statistical power of…
We present the Lyman-$\alpha$ Continuum Analysis Network (LyCAN), a Convolutional Neural Network that predicts the unabsorbed quasar continuum within the rest-frame wavelength range of $1040-1600$ Angstroms based on the red side of the…
As a flexible nonparametric learning tool, the random forests algorithm has been widely applied to various real applications with appealing empirical performance, even in the presence of high-dimensional feature space. Unveiling the…
In this work, we explore the application of intensity mapping to detect extended Ly$\alpha$ emission from the IGM via cross-correlation of PAUS images with Ly$\alpha$ forest data from eBOSS and DESI. Seven narrow-band (FWHM=13nm) PAUS…
We study approximation algorithms for the forest cover and bounded forest cover problems. A probabilistic $2+\epsilon$ approximation algorithm for the forest cover problem is given using the method of dual fitting. A deterministic algorithm…