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For a fixed graph H with t vertices, an H-factor of a graph G with n vertices, where t divides n, is a collection of vertex disjoint (not necessarily induced) copies of H in G covering all vertices of G. We prove that for a fixed tree T on…
An \emph{$H$-packing} in a graph $G$ is a collection of pairwise vertex-disjoint copies of $H$ in $G$. We prove that for every $c > 0$ and every bipartite graph $H$, any $\lfloor cn \rfloor$-regular graph $G$ admits an $H$-packing that…
Graphs are widely used to model complicated data semantics in many application domains. In this paper, two novel and efficient algorithms Fast-ON and Fast-P are proposed for solving the subgraph isomorphism problem. The two algorithms are…
A large number of NP-hard graph problems can be solved in $f(w)n^{O(1)}$ time and space when the input graph is provided together with a tree decomposition of width $w$, in many cases with a modest exponential dependence $f(w)$ on $w$.…
In this paper we study the computational complexity of the Upward Planarity Extension problem, which takes in input an upward planar drawing $\Gamma_H$ of a subgraph $H$ of a directed graph $G$ and asks whether $\Gamma_H$ can be extended to…
Genome assembly is a fundamental problem in Bioinformatics, where for a given set of overlapping substrings of a genome, the aim is to reconstruct the source genome. The classical approaches to solving this problem use assembly graphs, such…
An unweighted, undirected graph $G$ on $n$ nodes is said to have \emph{bandwidth} at most $k$ if its nodes can be labelled from $0$ to $n - 1$ such that no two adjacent nodes have labels that differ by more than $k$. It is known that one…
We solve the subgraph isomorphism problem in planar graphs in linear time, for any pattern of constant size. Our results are based on a technique of partitioning the planar graph into pieces of small tree-width, and applying dynamic…
Let $H$ be an undirected graph. In the List $H$-Homomorphism Problem, given an undirected graph $G$ with a list constraint $L(v) \subseteq V(H)$ for each variable $v \in V(G)$, the objective is to find a list $H$-homomorphism $f:V(G) \to…
In this paper we study a natural generalization of both {\sc $k$-Path} and {\sc $k$-Tree} problems, namely, the {\sc Subgraph Isomorphism} problem. In the {\sc Subgraph Isomorphism} problem we are given two graphs $F$ and $G$ on $k$ and $n$…
We consider the problem of finding a homomorphism from an input digraph $G$ to a fixed digraph $H$. We show that if $H$ admits a weak-near-unanimity polymorphism $\phi$ then deciding whether $G$ admits a homomorphism to $H$ (HOM($H$)) is…
The dual of a planar graph $G$ is a planar graph $G^*$ that has a vertex for each face of $G$ and an edge for each pair of adjacent faces of $G$. The profound relationship between a planar graph and its dual has been the algorithmic basis…
For some years it was believed that for "connectivity" problems such as Hamiltonian Cycle, algorithms running in time 2^{O(tw)}n^{O(1)} -called single-exponential- existed only on planar and other sparse graph classes, where tw stands for…
Graph homomorphism has been studied intensively. Given an m x m symmetric matrix A, the graph homomorphism function is defined as \[Z_A (G) = \sum_{f:V->[m]} \prod_{(u,v)\in E} A_{f(u),f(v)}, \] where G = (V,E) is any undirected graph. The…
Subdividing an edge $uv$ in a graph replaces it by a path $u w v$ with one new vertex. For a graph $H$, the \textsc{$H$-free Subdivision} problem asks whether, given a graph $G$ and an integer $k$, one can destroy all induced copies of $H$…
Exact pattern matching in labeled graphs is the problem of searching paths of a graph $G=(V,E)$ that spell the same string as the given pattern $P[1..m]$. This basic problem can be found at the heart of more complex operations on variation…
We study the space complexity of four variants of the standard subgraph finding problem in the streaming model. Specifically, given an $n$-vertex input graph and a fixed-size pattern graph, we consider two settings: undirected simple…
A homomorphism from a graph $G$ to a graph $H$ is an edge-preserving mapping from $V(G)$ to $V(H)$. In the graph homomorphism problem, denoted by $Hom(H)$, the graph $H$ is fixed and we need to determine if there exists a homomorphism from…
Convexity is a notion that has been defined for subsets of $\RR^n$ and for subsets of general graphs. A convex cut of a graph $G=(V, E)$ is a $2$-partition $V_1 \dot{\cup} V_2=V$ such that both $V_1$ and $V_2$ are convex, \ie shortest paths…
Let $G$ be a graph, and $H\colon V(G)\to 2^\mathbb{N}$ a set function associated with $G$. A spanning subgraph $F$ of $G$ is called an $H$-factor if the degree of any vertex $v$ in $F$ belongs to the set $H(v)$. This paper contains two…