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We consider the explanation problem of Graph Neural Networks (GNNs). Most existing GNN explanation methods identify the most important edges or nodes but fail to consider substructures, which are more important for graph data. The only…

Machine Learning · Computer Science 2023-02-28 Zhaoning Yu , Hongyang Gao

Understanding the structure and dynamics of biological networks is one of the important challenges in system biology. In addition, increasing amount of experimental data in biological networks necessitate the use of efficient methods to…

Artificial Intelligence · Computer Science 2012-07-17 Mohammadreza Keyvanpour , Fereshteh Azizani

In the age of social computing, finding interesting network patterns or motifs is significant and critical for various areas such as decision intelligence, intrusion detection, medical diagnosis, social network analysis, fake news…

Social and Information Networks · Computer Science 2022-04-07 Shuo Yu , Feng Xia , Yuchen Sun , Tao Tang , Xiaoran Yan , Ivan Lee

A foundation model like GPT elicits many emergent abilities, owing to the pre-training with broad inclusion of data and the use of the powerful Transformer architecture. While foundation models in natural languages are prevalent, can we…

Machine Learning · Computer Science 2025-06-18 Ziyuan Tang , Jie Chen

Graph-based computations are crucial in a wide range of applications, where graphs can scale to trillions of edges. To enable efficient training on such large graphs, mini-batch subgraph sampling is commonly used, which allows training…

Machine Learning · Computer Science 2025-04-04 Yue Jin , Yongchao Liu , Chuntao Hong

The main purpose of data mining and analytics is to find novel, potentially useful patterns that can be utilized in real-world applications to derive beneficial knowledge. For identifying and evaluating the usefulness of different kinds of…

This paper introduces Redescription Model Mining, a novel approach to identify interpretable patterns across two datasets that share only a subset of attributes and have no common instances. In particular, Redescription Model Mining aims to…

Databases · Computer Science 2021-07-12 Felix I. Stamm , Martin Becker , Markus Strohmaier , Florian Lemmerich

Reasoning over structured graphs remains a fundamental challenge for Large Language Models (LLMs), particularly when scaling to large graphs. Existing approaches typically follow the retrieval-augmented generation (RAG) paradigm: first…

Information Retrieval · Computer Science 2026-03-03 Haoyu Han , Kai Guo , Harry Shomer , Yu Wang , Yucheng Chu , Hang Li , Li Ma , Jiliang Tang

We discuss the problem of extending data mining approaches to cases in which data points arise in the form of individual graphs. Being able to find the intrinsic low-dimensionality in ensembles of graphs can be useful in a variety of…

Social and Information Networks · Computer Science 2016-12-12 Karthikeyan Rajendran , Assimakis A. Kattis , Alexander Holiday , Risi Kondor , Ioannis G. Kevrekidis

Visual patterns represent the discernible regularity in the visual world. They capture the essential nature of visual objects or scenes. Understanding and modeling visual patterns is a fundamental problem in visual recognition that has wide…

Computer Vision and Pattern Recognition · Computer Science 2018-06-15 Hongzhi Li , Joseph G. Ellis , Lei Zhang , Shih-Fu Chang

In this work, we study the correlation between attribute sets and the occurrence of dense subgraphs in large attributed graphs, a task we call structural correlation pattern mining. A structural correlation pattern is a dense subgraph…

Databases · Computer Science 2012-02-01 Arlei Silva , Wagner Meira , Mohammed J. Zaki

Process discovery algorithms learn process models from executed activity sequences, describing concurrency, causality, and conflict. Concurrent activities require observing multiple permutations, increasing data requirements, especially for…

Graph pattern matching is a fundamental operation for the analysis and exploration ofdata graphs. In thispaper, we presenta novel approachfor efficiently finding homomorphic matches for hybrid graph patterns, where each pattern edge may be…

Databases · Computer Science 2022-09-29 Xiaoying Wu , Dimitri Theodoratos , Nikos Mamoulis , Michael Lan

Subgraph discovery in a single data graph---finding subsets of vertices and edges satisfying a user-specified criteria---is an essential and general graph analytics operation with a wide spectrum of applications. Depending on the criteria,…

Databases · Computer Science 2018-07-25 Aparna Joshi , Yu Zhang , Petko Bogdanov , Jeong-Hyon Hwang

Recent research in both academia and industry has validated the effectiveness of provenance graph-based detection for advanced cyber attack detection and investigation. However, analyzing large-scale provenance graphs often results in…

Cryptography and Security · Computer Science 2024-07-11 Zhenyuan Li , Yangyang Wei , Xiangmin Shen , Lingzhi Wang , Yan Chen , Haitao Xu , Shouling Ji , Fan Zhang , Liang Hou , Wenmao Liu , Xuhong Zhang , Jianwei Ying

Core-periphery detection is a key task in exploratory network analysis where one aims to find a core, a set of nodes well-connected internally and with the periphery, and a periphery, a set of nodes connected only (or mostly) with the core.…

Social and Information Networks · Computer Science 2022-02-28 Francesco Tudisco , Desmond J. Higham

Many scientific datasets are of high dimension, and the analysis usually requires visual manipulation by retaining the most important structures of data. Principal curve is a widely used approach for this purpose. However, many existing…

Artificial Intelligence · Computer Science 2016-01-19 Qi Mao , Li Wang , Ivor W. Tsang , Yijun Sun

Large-scale distributed graph-parallel computing is challenging. On one hand, due to the irregular computation pattern and lack of locality, it is hard to express parallelism efficiently. On the other hand, due to the scale-free nature,…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-10-22 Jie Yan , Guangming Tan , Ninghui Sun

Component-centric distributed graph processing platforms that use a bulk synchronous parallel (BSP) programming model have gained traction. These address the short-comings of Big Data abstractions/platforms like MapReduce/Hadoop for…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-13 Ravikant Dindokar , Neel Choudhury , Yogesh Simmhan

Motivated by chemical applications, we revisit and extend a family of positive definite kernels for graphs based on the detection of common subtrees, initially proposed by Ramon et al. (2003). We propose new kernels with a parameter to…

Quantitative Methods · Quantitative Biology 2016-08-16 Pierre Mahé , Jean-Philippe Vert
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