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In models of Pt 111 and Pt 100 surfaces in water, motions of molecules in the first hydration layer are spatially and temporally correlated. To interpret these collective motions, we apply quantitative measures of dynamic heterogeneity that…

Materials Science · Physics 2015-06-15 Adam P. Willard , David T. Limmer , Paul A. Madden , David Chandler

The method for production of atomic chains by heating of graphene nanoribbons (GNRs) is proposed and studied by molecular dynamics simulations. The Brenner potential is revised to adequately describe formation of atomic chains, edges and…

Mesoscale and Nanoscale Physics · Physics 2018-10-09 Alexander S. Sinitsa , Irina V. Lebedeva , Andrey M. Popov , Andrey A. Knizhnik

Catalytic hydrogenation of graphite has recently attracted renewed attention, as a route for nano-patterning of graphene and to produce graphene nano-ribbons. These reports show that metallic nanoparticles etch surface layers of graphite,…

Mesoscale and Nanoscale Physics · Physics 2015-06-05 Maya Lukas , Velimir Meded , Aravind Vijayaraghavan , Li Song , Pulickel M. Ajayan , Karin Fink , Wolfgang Wenzel , Ralph Krupke

We demonstrate the high stability of simulated graphene hyperbolic pseudospheres under large externally imposed deformations and high temperature annealing. Hyperbolic pseudospheres are produced in a two-step Molecular Dynamics simulation…

Mesoscale and Nanoscale Physics · Physics 2025-11-03 T. P. C. Klaver , R. Gabbrielli , V. Tynianska , A. Iorio , D. Legut

This study deals with the understanding of hydrogen atom scattering from graphene, a process critical for exploring C-H bond formation and energy transfer during the atom surface collision. In our previous work (J.Chem.Phys \textbf{159},…

Graphynes are 2D porous structures deriving from graphene featuring triangular and regularly distributed subnanometer pores, which may be exploited to host small gaseous species. First principles adsorption energies of molecular hydrogen…

Chemical Physics · Physics 2015-10-06 Massimiliano Bartolomei , Estela Carmona-Novillo , Giacomo Giorgi

In nanoscale, motion operation of a nano-objective is usually realized by displacement load, which put forwards high requirement for ductility of material. Since pristine graphene has low ductility, once the stretching strain exceeds its…

Computational Physics · Physics 2020-09-01 Jiao Shi , Jia-Long Zhang , Xin Li , Bo Song

Experimental evidence of novel phenomena in hydrogenated graphite fibers is found. An indirect excitonic mechanism is likely leading to a SC state below the temperature Tc = 50 K, where the gap is divergent. Analysis of the gap within the…

Superconductivity · Physics 2023-02-15 Nadina Gheorghiu , Charles R. Ebbing , Timothy J. Haugan

The specific rotational alignment of two-dimensional lattices results in a moir\'e superlattice with a larger period than the original lattices and allows one to engineer the electronic band structure of such materials. So far, transport…

The physical nature and the correct definition of hydrogen bond (H-bond) are considered.\,\,The influence of H-bonds on the thermodynamic, kinetic, and spectroscopic properties of water is analyzed.\,\,The conventional model of H-bonds as…

Chemical Physics · Physics 2015-09-02 I. V. Zhyganiuk , M. P. Malomuzh

Molecular dynamics (MD) simulations were performed to study the formation process of nanopores in a suspended graphene sheet irradiated by using energetic ions though a mask. By controlling the ion parameters including mass, energy and…

Mesoscale and Nanoscale Physics · Physics 2016-03-10 Weisen Li , Li Liang , Shijun Zhao , Shuo zhang , Jianming Xue

Using classical molecular dynamics simulation, we have studied the effect of edge-passivation by hydrogen (H-passivation) and isotope mixture (with random or supperlattice distributions) on the thermal conductivity of rectangular graphene…

Mesoscale and Nanoscale Physics · Physics 2016-11-27 Jiuning Hu , Stephen Schiffli , Ajit Vallabhaneni , Xiulin Ruan , Yong P. Chen

A range of twist angles between adjacent surfaces/volumes are intrinsic to natural graphite or artificially design in multi-layer graphene. In addition, stacking faults can be created by the application of mechanic, electric or magnetic…

Mesoscale and Nanoscale Physics · Physics 2025-12-15 Nadina Gheorghiu , Charles R. Ebbing , George Y. Panasyuk , Timothy J. Haugan

In this work we present a fully atomistic reactive (ReaxFF force field) molecular dynamics study of the structural and dynamical aspects of the one-side hydrogenation of graphene membranes, leading to the formation of the so-called graphone…

Mesoscale and Nanoscale Physics · Physics 2016-06-30 Cristiano Francisco Woellner , Pedro Alves da Silva Autreto , Douglas S. Galvao

Hypergraphs are powerful mathematical structures that can model complex, high-order relationships in various domains, including social networks, bioinformatics, and recommender systems. However, generating realistic and diverse hypergraphs…

Machine Learning · Computer Science 2026-03-11 Dorian Gailhard , Enzo Tartaglione , Lirida Naviner , Jhony H. Giraldo

Graphene-based materials (GBMs) constitute a large family of materials which has attracted great interest for potential applications. In this work, we apply first-principles calculations based on density functional theory (DFT) and fully…

Materials Science · Physics 2021-05-05 Enesio Marinho , Pedro A. S. Autreto

There is a large discrepancy between the experimental observations and the theoretical predictions in the morphology of hexagonal boron nitride (h-BN) nanosheets. Theoretically-predicted hexagons terminated by armchair edges are not…

Materials Science · Physics 2018-08-31 Jingzhao Zhang , Wenjing Zhao , Junyi Zhu

Lipid structures exhibit complex and highly dynamic lateral structure; and changes in lipid density and fluidity are believed to play an essential role in membrane targeting and function. The dynamic structure of liquids on the molecular…

Soft Condensed Matter · Physics 2016-12-21 Neda Dadashvand , Christina M. Othon

Holey graphene (HG) is a novel two-dimensional (2D) material that has attracted considerable attention due to its remarkable electrical, thermal, and mechanical properties. The recent discovery of flat bands in HG has garnered significant…

Optics · Physics 2025-08-01 Abdiel de Jesús Espinosa-Champo , Gerardo G. Naumis

In this work, we study the thermal energy transport properties of twin graphene, which has been introduced recently as a new two-dimensional carbon nano structure. The thermal conductivity is investigated using non-equilibrium molecular…

Computational Physics · Physics 2020-12-30 Fatemeh Rezaee , Farrokh Yousefi , Farhad Khoeini