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In this paper we propose a novel deep learning-based algorithm for biomedical image segmentation which uses a sequential attention mechanism able to shift the focus of attention across the image in a selective way, allowing subareas which…

Computer Vision and Pattern Recognition · Computer Science 2019-09-30 Shohei Hayashi , Bisser Raytchev , Toru Tamaki , Kazufumi Kaneda

Objective. Limited access to breast cancer diagnosis globally leads to delayed treatment. Ultrasound, an effective yet underutilized method, requires specialized training for sonographers, which hinders its widespread use. Approach. Volume…

Image and Video Processing · Electrical Eng. & Systems 2023-11-21 Donya Khaledyan , Thomas J. Marini , Avice OConnell , Steven Meng , Jonah Kan , Galen Brennan , Yu Zhao , Timothy M. Baran , Kevin J. Parker

Contrast-enhanced Computed Tomography (CT) is important for diagnosis and treatment planning for various medical conditions. Deep learning (DL) based segmentation models may enable automated medical image analysis for detecting and…

Computer Vision and Pattern Recognition · Computer Science 2025-10-10 Eirik A. Østmo , Kristoffer K. Wickstrøm , Keyur Radiya , Michael C. Kampffmeyer , Karl Øyvind Mikalsen , Robert Jenssen

Accurate segmentation of multiple organs and the differentiation of pathological tissues in medical imaging are crucial but challenging, especially for nuanced classifications and ambiguous organ boundaries. To tackle these challenges, we…

Image and Video Processing · Electrical Eng. & Systems 2024-09-23 Chengkun Sun , Russell Stevens Terry , Jiang Bian , Jie Xu

Volumetric medical segmentation is a critical component of 3D medical image analysis that delineates different semantic regions. Deep neural networks have significantly improved volumetric medical segmentation, but they generally require…

Image and Video Processing · Electrical Eng. & Systems 2024-07-18 Hanan Gani , Muzammal Naseer , Fahad Khan , Salman Khan

Voxel is an important format to represent geometric data, which has been widely used for 3D deep learning in shape analysis due to its generalization ability and regular data format. However, fine-grained tasks like part segmentation…

Computer Vision and Pattern Recognition · Computer Science 2018-09-05 Zongji Wang , Feng Lu

Instance segmentation in 3D images is a fundamental task in biomedical image analysis. While deep learning models often work well for 2D instance segmentation, 3D instance segmentation still faces critical challenges, such as insufficient…

Computer Vision and Pattern Recognition · Computer Science 2018-07-02 Zhuo Zhao , Lin Yang , Hao Zheng , Ian H. Guldner , Siyuan Zhang , Danny Z. Chen

Detecting objects from LiDAR point clouds is of tremendous significance in autonomous driving. In spite of good progress, accurate and reliable 3D detection is yet to be achieved due to the sparsity and irregularity of LiDAR point clouds.…

Computer Vision and Pattern Recognition · Computer Science 2022-03-21 Shengheng Deng , Zhihao Liang , Lin Sun , Kui Jia

Due to the inter- and intra- variation of respiratory motion, it is highly desired to provide real-time volumetric images during the treatment delivery of lung stereotactic body radiation therapy (SBRT) for accurate and active motion…

Medical image segmentation has witnessed significant advancements with the emergence of deep learning. However, the reliance of most neural network models on a substantial amount of annotated data remains a challenge for medical image…

Computer Vision and Pattern Recognition · Computer Science 2024-07-30 Xiaoxiao Wu , Xiaowei Chen , Zhenguo Gao , Shulei Qu , Yuanyuan Qiu

Improving connectivity and completeness are the most challenging aspects of liver vessel segmentation, especially for small vessels. These challenges require both learning the continuous vessel geometry, and focusing on small vessel…

Image and Video Processing · Electrical Eng. & Systems 2025-10-28 Xiaotong Zhang , Alexander Broersen , Gonnie CM van Erp , Silvia L. Pintea , Jouke Dijkstra

3D to 2D retinal vessel segmentation is a challenging problem in Optical Coherence Tomography Angiography (OCTA) images. Accurate retinal vessel segmentation is important for the diagnosis and prevention of ophthalmic diseases. However,…

Image and Video Processing · Electrical Eng. & Systems 2021-12-17 Zhuojie Wu , Zijian Wang , Wenxuan Zou , Fan Ji , Hao Dang , Wanting Zhou , Muyi Sun

Myocardial Velocity Mapping Cardiac MR (MVM-CMR) can be used to measure global and regional myocardial velocities with proved reproducibility. Accurate left ventricle delineation is a prerequisite for robust and reproducible myocardial…

Image and Video Processing · Electrical Eng. & Systems 2021-04-28 Mengmeng Kuang , Yinzhe Wu , Diego Alonso-Álvarez , David Firmin , Jennifer Keegan , Peter Gatehouse , Guang Yang

Liver cancer is one of the leading causes of cancer death. To assist doctors in hepatocellular carcinoma diagnosis and treatment planning, an accurate and automatic liver and tumor segmentation method is highly demanded in the clinical…

Computer Vision and Pattern Recognition · Computer Science 2018-07-04 Xiaomeng Li , Hao Chen , Xiaojuan Qi , Qi Dou , Chi-Wing Fu , Pheng Ann Heng

Recently deep residual learning with residual units for training very deep neural networks advanced the state-of-the-art performance on 2D image recognition tasks, e.g., object detection and segmentation. However, how to fully leverage…

Computer Vision and Pattern Recognition · Computer Science 2016-08-23 Hao Chen , Qi Dou , Lequan Yu , Pheng-Ann Heng

Volume visualization is a method that displays three-dimensional (3D) data in two-dimensional (2D) space. Using 3D datasets instead of 2D traditional images improves the visualization of anatomical structures, and volume visualization helps…

Convolutional neural networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they have not demonstrated sufficiently accurate and robust results for clinical use. In addition, they are…

Computer Vision and Pattern Recognition · Computer Science 2018-07-23 Guotai Wang , Wenqi Li , Maria A. Zuluaga , Rosalind Pratt , Premal A. Patel , Michael Aertsen , Tom Doel , Anna L. David , Jan Deprest , Sebastien Ourselin , Tom Vercauteren

Automated blood vessel segmentation is vital for biomedical imaging, as vessel changes indicate many pathologies. Still, precise segmentation is difficult due to the complexity of vascular structures, anatomical variations across patients,…

Self-supervised learning methods based on image patch reconstruction have witnessed great success in training auto-encoders, whose pre-trained weights can be transferred to fine-tune other downstream tasks of image understanding. However,…

Computer Vision and Pattern Recognition · Computer Science 2022-09-20 Junjia Huang , Haofeng Li , Guanbin Li , Xiang Wan

In-context learning (ICL) with Large Vision Models (LVMs) presents a promising avenue in medical image segmentation by reducing the reliance on extensive labeling. However, the ICL performance of LVMs highly depends on the choices of visual…

Computer Vision and Pattern Recognition · Computer Science 2024-07-17 Chenwei Wu , David Restrepo , Zitao Shuai , Zhongming Liu , Liyue Shen
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