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Biological cells embedded in fibrous matrices have been observed to form inter-cellular bands of dense and aligned fibers, through which they mechanically interact over long distances. Such matrix-mediated cellular interactions have been…

Biological Physics · Physics 2018-11-14 Ran S Sopher , Hanan Tokash , Sari Natan , Mirit Sharabi , Ortal Shelah , Oren Tchaicheeyan , Ayelet Lesman

Single and collective cell migration are fundamental processes critical for physiological phenomena ranging from embryonic development and immune response to wound healing and cancer metastasis. To understand cell migration from a physical…

Biological Physics · Physics 2023-10-10 David B. Brückner , Chase P. Broedersz

We present a comprehensive computational study of the collective behavior emerging from the competition between self-propulsion, excluded volume interactions and velocity-alignment in a two-dimensionnal model of active particles. We…

Soft Condensed Matter · Physics 2018-01-08 Aitor Martín-Gómez , Demian Levis , Albert Díaz-Guilera , Ignacio Pagonabarraga

The transport of active particles may occur in complex environments, in which it emerges from the interplay between the mobility of the active components and the quenched disorder of the environment. Here we explore structural and dynamical…

Soft Condensed Matter · Physics 2023-03-31 Fergus J. Moore , John Russo Tanniemola B. Liverpool , C. Patrick Royall

Active particle systems of interacting self-propelled particles offer a versatile framework for modeling complex systems. When employed to describe aspects of animal behavior, the complexity of animal movement and decision-making often…

Biological Physics · Physics 2025-01-09 Amir Haluts , Dan Gorbonos , Nir S. Gov

While it is well established that self-propelled particles with alignment interactions can exhibit orientational order, the impact of self-replication and annihilation, which are key characteristics in cellular systems, on spatiotemporal…

Populations and Evolution · Quantitative Biology 2025-09-09 Seiya Takamura , Nen Saito

Collective cell migration underlies important biological processes, such as embryonic development, wound healing and cancer invasion. While many aspects of single cell movements are now well established, the mechanisms leading to…

Mechanical stress plays an intricate role in gene expression in individual cells and sculpting of developing tissues. However, systematic methods of studying how mechanical stress and feedback help to harmonize cellular activities within a…

Soft Condensed Matter · Physics 2016-09-21 Guo-Jie Jason Gao , Michael C. Holcomb , Jeffrey H. Thomas , Jerzy Blawzdziewicz

In this work we approach cell migration under a large-scale assumption, so that the system reduces to a particle in motion. Unlike classical particle models, the cell displacement results from its internal activity: the cell velocity is a…

Cell Behavior · Quantitative Biology 2018-08-02 Christèle Etchegaray , Nicolas Meunier

Mathematical models are vital interpretive and predictive tools used to assist in the understanding of cell migration. There are typically two approaches to modelling cell migration: either micro-scale, discrete or macro-scale, continuum.…

Cell Behavior · Quantitative Biology 2018-08-16 Enrico Gavagnin , Christian A. Yates

Many fundamental biological processes are dependent on cellular migration. Although the mechanical mechanisms of single-cell migration are relatively well understood, those underlying migration of multiple cells adhered to each other in a…

Biological Physics · Physics 2023-07-25 Katsuhiko Sato

Recent advances in micro- and nano-technologies allow the construction of complex active systems from biological and synthetic materials. An interesting example is active vesicles, which consist of a membrane enclosing self-propelled…

Soft Condensed Matter · Physics 2024-06-04 Priyanka Iyer , Gerhard Gompper , Dmitry A. Fedosov

Collective cell migration is a key driver of embryonic development, wound healing, and some types of cancer invasion. Here we provide a physical perspective of the mechanisms underlying collective cell migration. We begin with a catalogue…

Biological Physics · Physics 2019-10-08 Ricard Alert , Xavier Trepat

This paper presents a polarization-aware movable antenna (PAMA) framework that integrates polarization effects into the design and optimization of movable antennas (MAs). While MAs have proven effective at boosting wireless communication…

Information Theory · Computer Science 2025-07-25 Runxin Zhang , Yulin Shao , Yonina C. Eldar

We consider the dynamics of cargo driven by a collection of interacting molecular motors in the context of an asymmetric simple exclusion processes (ASEP). The model is formulated to account for i) excluded volume interactions, ii) the…

Subcellular Processes · Quantitative Biology 2015-05-13 Carla Goldman , Elisa T. Sena

Systems of independent active particles embedded into a fluctuating environment are relevant to many areas of soft-matter science. We use a minimal model of noninteracting spin-carrying Brownian particles in a Gaussian field and show that…

Soft Condensed Matter · Physics 2018-07-18 Ruben Zakine , Jean-Baptiste Fournier , Frédéric Van Wijland

We show techniques of analyzing complex dynamics of cellular automata (CA) with chaotic behaviour. CA are well known computational substrates for studying emergent collective behaviour, complexity, randomness and interaction between order…

Cellular Automata and Lattice Gases · Physics 2012-03-29 Genaro J. Martinez , Andrew Adamatzky , Ramon Alonso-Sanz

Many animal cells change their shape depending on the stiffness of the substrate on which they are cultured: they assume small, rounded shapes in soft ECMs, they elongate within stiffer ECMs, and flatten out on hard substrates. Cells tend…

Cell Behavior · Quantitative Biology 2019-06-24 Elisabeth G. Rens , Roeland M. H. Merks

The vast majority of biochemical systems involve the exchange of information between different compartments, either in the form of transportation or via the intervention of membrane proteins which are able to transmit stimuli between…

Computational Engineering, Finance, and Science · Computer Science 2009-11-30 Federica Ciocchetta , Adam Duguid , Maria Luisa Guerriero

We present a mode-coupling theory (MCT) for the high-density dynamics of two-dimensional spherical active Brownian particles (ABP). The theory is based on the integration-through-transients (ITT) formalism and hence provides a starting…

Soft Condensed Matter · Physics 2017-12-20 Alexander Liluashvili , Jonathan Onody , Thomas Voigtmann