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Software repositories are rich sources of qualitative artifacts, including source code comments, commit messages, issue descriptions, and documentation. These artifacts offer many interesting insights when analyzed through quantitative…

Software Engineering · Computer Science 2024-06-13 Christoph Treude

In the digital age, the amount of data produced is growing exponentially. Governments and institutions can no longer rely on old methods for storing data and passing on the knowledge to future generations. Digital data preservation is a…

Digital Libraries · Computer Science 2017-07-21 Carlos André Rosa , Olga Craveiro , Patricio Domingues

Are others using software you've written in their research and citing it as you want it to be cited? Software can be cited in different ways, some good, and some not good at all for tracking and counting citations in indexers such as ADS…

Instrumentation and Methods for Astrophysics · Physics 2022-12-27 Alice Allen

Software is a fundamental pillar of modern scientiic research, not only in computer science, but actually across all elds and disciplines. However, there is a lack of adequate means to cite and reference software, for many reasons. An…

SAT research has a long history of source code and binary releases, thanks to competitions organized every year. However, since every cycle of competitions has its own set of rules and an adhoc way of publishing source code and binaries,…

Artificial Intelligence · Computer Science 2020-06-03 Gilles Audemard , Loïc Paulevé , Laurent Simon

Background: Data mining and analyzing of public Git software repositories is a growing research field. The tools used for studies that investigate a single project or a group of projects have been refined, but it is not clear whether the…

Software Engineering · Computer Science 2020-08-18 Adam Tutko , Austin Henley , Audris Mockus

This paper presents results from the MSR 2021 Hackathon. Our team investigates files/projects that contain known security vulnerabilities and how widespread they are throughout repositories in open source software. These security…

Software Engineering · Computer Science 2021-03-24 David Reid , Kalvin Eng , Chris Bogart , Adam Tutko

Software is now a vital scientific instrument, providing the tools for data collection and analysis across disciplines from bioinformatics and computational physics, to the humanities. The software used in research is often home-grown and…

Software Engineering · Computer Science 2019-03-15 Mario Rosado de Souza , Robert Haines , Markel Vigo , Caroline Jay

Scientific software is essential to scientific innovation and in many ways it is distinct from other types of software. Abandoned (or unmaintained), buggy, and hard to use software, a perception often associated with scientific software can…

Software Engineering · Computer Science 2025-06-23 Addi Malviya Thakur , Reed Milewicz , Mahmoud Jahanshahi , Lavínia Paganini , Bogdan Vasilescu , Audris Mockus

Although computer science papers are often accompanied by software artifacts, connecting research papers to their software artifacts and vice versa is not always trivial. First of all, there is a lack of well-accepted standards for how such…

Software Engineering · Computer Science 2021-04-14 Hideaki Hata , Jin L. C. Guo , Raula Gaikovina Kula , Christoph Treude

The advancements in machine learning techniques have encouraged researchers to apply these techniques to a myriad of software engineering tasks that use source code analysis, such as testing and vulnerability detection. Such a large number…

Software Engineering · Computer Science 2022-09-14 Tushar Sharma , Maria Kechagia , Stefanos Georgiou , Rohit Tiwari , Indira Vats , Hadi Moazen , Federica Sarro

[Background] In large open-source software projects, development knowledge is often fragmented across multiple artefacts and contributors such that individual stakeholders are generally unaware of the full breadth of the product features.…

Software Engineering · Computer Science 2024-08-05 Tim Puhlfürß , Lloyd Montgomery , Walid Maalej

We study the evolution of the largest known corpus of publicly available source code, i.e., the Software Heritage archive (4B unique source code files, 1B commits capturing their development histories across 50M software projects). On such…

Software Engineering · Computer Science 2019-06-20 Guillaume Rousseau , Roberto Di Cosmo , Stefano Zacchiroli

Software now lies at the heart of scholarly research. Here we argue that as well as being important from a methodological perspective, software should, in many instances, be recognised as an output of research, equivalent to an academic…

Computers and Society · Computer Science 2021-12-23 Caroline Jay , Robert Haines , Daniel S. Katz

With the advent of open source software, a veritable treasure trove of previously proprietary software development data was made available. This opened the field of empirical software engineering research to anyone in academia. Data that is…

Software Engineering · Computer Science 2022-04-19 Adam Tutko , Austin Z. Henley , Audris Mockus

The main output of the FORCE11 Software Citation working group (https://www.force11.org/group/software-citation-working-group) was a paper on software citation principles (https://doi.org/10.7717/peerj-cs.86) published in September 2016.…

This paper proposes a software repository model together with associated tooling and consists of several complex, open-source GUI driven applications ready to be used in empirical software research. We start by providing the rationale for…

Software Engineering · Computer Science 2017-02-28 Arthur-Jozsef Molnar

Under the data-driven research paradigm, research software has come to play crucial roles in nearly every stage of scientific inquiry. Scholars are advocating for the formal citation of software in academic publications, treating it on par…

Digital Libraries · Computer Science 2023-07-19 Yuzhuo Wang , Kai Li

Clone-and-own is a typical code reuse approach because of its simplicity and efficiency. Cloned software components are maintained independently by a new owner. These clone-and-own operations can be occurred sequentially, that is, cloned…

Software Engineering · Computer Science 2022-04-14 Hideaki Hata , Takashi Ishio

So far, the relationship between open science and software engineering expertise has largely focused on the open release of software engineering research insights and reproducible artifacts, in the form of open-access papers, open data, and…

Software Engineering · Computer Science 2024-09-17 Cynthia C. S. Liem , Andrew M. Demetriou