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Dynamic force spectroscopy (DFS) is an experimental technique that is commonly used to assess information of the strength, energy landscape, and lifetime of noncovalent bio-molecular interactions. DFS traditionally requires an applied force…

Biological Physics · Physics 2016-07-04 Oscar Björnham , Magnus Andersson

Modeling nuclear quantum effects is required for accurate molecular dynamics (MD) simulations of molecules. The community has paid special attention to water and other biomolecules that show hydrogen bonding. Standard methods of modeling…

Chemical Physics · Physics 2020-07-06 Vikram Sundar , David Gelbwaser-Klimovsky , Alan Aspuru-Guzik

We review the different aspects of the interaction of mesoscopic quantum systems with gravitational fields. We first discuss briefly the foundations of general relativity and quantum mechanics. Then, we consider the non-relativistic…

General Relativity and Quantum Cosmology · Physics 2009-11-10 Claus Kiefer , Carsten Weber

Phase spaces with nontrivial geometry appear in different approaches to quantum gravity and can also play a role in e.g. condensed matter physics. However, so far such phase spaces have only been considered for particles or strings. We…

High Energy Physics - Theory · Physics 2017-05-30 Tomasz Trześniewski

In the present research, a variational technique to modifying the Poisson equation is presented, expanding its modelling capabilities to include a wider range of physical processes and resonant structures. The study examines the…

General Physics · Physics 2024-01-30 Mario J. Pinheiro

In this short note we sketch the statistical physics framework of the replica exchange technique when applied to molecular dynamics simulations. In particular, we draw attention to generalized move sets that allow a variety of optimizations…

Quantitative Methods · Quantitative Biology 2009-11-13 Walter Nadler , Ulrich H. E. Hansmann

We use a perturbative approach to evaluate transition amplitudes corresponding to quantum friction, for a scalar model describing an atom which moves at a constant velocity, close to a material plane. In particular, we present results on…

High Energy Physics - Theory · Physics 2023-08-29 Aitor Fernández , C. D. Fosco

The study of molecular physics using ultracold gases has provided a unique probe into the fundamental properties of nature and offers new tools for quantum technologies. In this article we outline how the use of a space environment to study…

After a brief review on the status of few--nucleon studies based on conventional nuclear forces, we sketch the concepts of the effective field theory approach constrained by chiral symmetry and its application to nuclear forces. Then first…

Nuclear Theory · Physics 2017-08-23 W. Gloeckle , E. Epelbaum , U. G. Meissner , A. Nogga , H. Kamada , H. Witala

New techniques for evaluating the closed time path action for non-equilibrium quantum fields are presented. A derivative expansion is performed using a proper time kernel. Applications relevant to the scalar field theory of warm inflation…

High Energy Physics - Phenomenology · Physics 2009-11-07 Ian G Moss

In recent years, deep learning has made remarkable strides, surpassing human capabilities in tasks like strategy games, and it has found applications in complex domains, including protein folding. In the realm of quantum chemistry, machine…

Chemical Physics · Physics 2024-01-09 Rhyan Barrett , Julia Westermayr

Hybrid particle-field methods are computationally efficient approaches for modelling soft matter systems. So far applications of these methodologies have been limited to constant volume conditions. Here, we reformulate particle-field…

Reaction-diffusion processes play an important role in a variety of physical, chemical, and biological systems. Conventionally, the kinetics of these processes are described by the law of mass action. However, there are various cases where…

Chemical Physics · Physics 2026-05-06 Roman V. Li , Oleg A. Igoshin , Evgeny B. Krissinel , Pavel A. Frantsuzov

Predicting the adsorption affinity of a small molecule to a target surface is of importance to a range of fields, from catalysis to drug delivery and human safety, but a complex task to perform computationally when taking into account the…

Chemical Physics · Physics 2022-11-16 Ian Rouse , Vladimir Lobaskin

Modern machine learning force fields (ML-FF) are able to yield energy and force predictions at the accuracy of high-level $ab~initio$ methods, but at a much lower computational cost. On the other hand, classical molecular mechanics force…

We present polynomial force reconstruction from experimental intermodulation atomic force microscopy (ImAFM) data. We study the tip-surface force during a slow surface approach and compare the results with amplitude-dependence force…

Mesoscale and Nanoscale Physics · Physics 2013-02-08 Daniel Platz , Daniel Forchheimer , Erik A. Tholen , David B. Haviland

Plasma supports collective modes and particle-wave interactions that leads to complex behavior in inertial fusion energy applications. While plasma can sometimes be modeled as a charged fluid, a kinetic description is useful towards the…

Plasma Physics · Physics 2022-11-28 Archis S. Joglekar , Alexander G. R. Thomas

The quantum diffusion approach is extended to low energy fusion (capture) reactions of light- and medium-mass nuclei. The dependence of the friction parameter on bombarding energy is taken into account. A simple analytic expression is…

Nuclear Theory · Physics 2020-07-15 V. V. Sargsyan , G. G. Adamian , N. V. Antonenko , H. Lenske

While historically many quantum mechanical simulations of molecular dynamics have relied on the Born-Oppenheimer approximation to separate electronic and nuclear behavior, recently a lot of interest has arisen towards quantum effects in…

Quantum Physics · Physics 2018-06-06 Simone Sturniolo

Force fields for molecular dynamics are usually developed manually, limiting their transferability and making systematic exploration of functional forms challenging. We developed a graph neural network that assigns all force field…

Biomolecules · Quantitative Biology 2026-03-18 Alexandre Blanco-González , Thea K Schulze , Evianne Rovers , Joe G Greener