English
Related papers

Related papers: Dynamics of Fiberboids

200 papers

Can a filament transmit the curvatures across the constituting modules and control them at one of its end? Inspired by the observation of protofilament - constituent biopolymer of microtubule - this question is addressed by a constructive…

Classical Physics · Physics 2024-09-24 Ken Sekimoto

We consider a model of an extensible semiflexible filament moving in two dimensions on a motility assay of motor proteins represented explicitly as active harmonic linkers. Their heads bind stochastically to polymer segments within a…

Biological Physics · Physics 2021-08-31 Amir Shee , Nisha Gupta , Abhishek Chaudhuri , Debasish Chaudhuri

Motor proteins drive persistent motion and self-organisation of cytoskeletal filaments. However, state-of-the-art microscopy techniques and continuum modelling approaches focus on large length and time scales. Here, we perform…

Soft Condensed Matter · Physics 2024-06-03 Gerrit Vliegenthart , Arvind Ravichandran , Marisol Ripoll , Thorsten Auth , Gerhard Gompper

In various cellular processes, biofilaments like F-actin and F-tubulin are able to exploit chemical energy associated to polymerization to perform mechanical work against an external load. The force-velocity relationship quantitatively…

Statistical Mechanics · Physics 2018-04-04 Alessia Perilli , Carlo Pierleoni , Giovanni Ciccotti , Jean-Paul Ryckaert

Molecular motors are essential to the living, they generate additional fluctuations that boost transport and assist assembly. Self-propelled colloids, that consume energy to move, hold similar potential for the man-made assembly of…

Soft Condensed Matter · Physics 2019-09-18 Sophie Ramananarivo , Etienne Ducrot , Jeremie Palacci

Navigation of microorganisms is controlled by internal processes ultimately sensitive to mechanical or chemical signaling encountered along the path. In many natural environments, such as porous soils or physiological ducts, motile species…

Active solids such as cell collectives, colloidal clusters, and active metamaterials exhibit diverse collective phenomena, ranging from rigid body motion to shape-changing mechanisms. The nonlinear dynamics of such active materials remains…

Soft Condensed Matter · Physics 2024-06-21 Claudio Hernández-López , Paul Baconnier , Corentin Coulais , Olivier Dauchot , Gustavo Düring

We present a simple and generic theoretical description of actin-based motility, where polymerization of filaments maintains propulsion. The dynamics is driven by polymerization kinetics at the filaments' free ends, crosslinking of the…

Cell Behavior · Quantitative Biology 2015-05-13 Azam Gholami , Martin Falcke , Erwin Frey

The design of desired behaviors in mechanical metamaterials has produced remarkable advances but has generally neglected two aspects - the inevitable presence of undesired behaviors and the role of dynamics in avoiding such behaviors.…

Soft Condensed Matter · Physics 2019-10-22 Menachem Stern , Viraaj Jayaram , Arvind Murugan

The dynamics of wire frame particles in concentrated suspension are studied by means of a 2D model and compared to those of rod-like particles. The wire frames have bent or branched structures constructed from infinitely thin rigid rods. In…

Soft Condensed Matter · Physics 2023-11-01 David A. King

The present work investigates the mechanical behaviour of finite-size, elastic and inertial fibres freely moving in a homogeneous and isotropic turbulent flow at moderate Reynolds number. Fully-resolved, direct numerical simulations, based…

Fluid Dynamics · Physics 2022-08-24 Stefano Olivieri , Andrea Mazzino , Marco E. Rosti

Fluid-fluid interfaces laden with discrete particles behave curiously like continuous elastic sheets, leading to their applications in emulsion and foam stabilization. Although existing continuum models can qualitatively capture the elastic…

Soft Condensed Matter · Physics 2025-02-18 Ranit Mukherjee , Zih-Yin Chen , Xiang Cheng , Sungyon Lee

Evaporating colloidal droplets have long been used as model systems to understand capillarity, interfacial transport, and particle assembly, most prominently through the coffee ring effect. In classical descriptions, suspended particles are…

Soft Condensed Matter · Physics 2026-05-15 Meneka Banik , Ranjini Bandyopadhyay

The structure and dynamics of froths have been subjects of intense interest due to the desire to understand the behaviour of complex systems where topological intricacy prohibits exact evaluation of the ground state. The dynamics of a…

Superconductivity · Physics 2009-02-02 Ruslan Prozorov , Andrew F. Fidler , Jacob Hoberg , Paul C. Canfield

We introduce a three-dimensional model for polyelectrolyte hydrogel filaments operating in a fluid environment under an electric field. The formulation builds on a morphoelastic framework for inextensible and unshearable rods, such that the…

Mobile microscopic bodies, such as motile cells, can be modelled phenomenologically as ``active particles'' which can move against external forces by depleting an internal energy depot. The microscopic mechanisms underlying such ``active''…

Statistical Mechanics · Physics 2024-02-01 Diego Marcel Fieguth

Bacterial attachment to a fluid interface can lead to the formation of a film with physicochemical properties that evolve with time. We study the time evolution of interface (micro)mechanics for interfaces between oil and bacterial…

Soft Condensed Matter · Physics 2015-03-26 Liana Vaccari , Daniel Allan , Nima Sharifi-Mood , Aayush Singh , Robert Leheny , Kathleen Stebe

In cellular vortical flows, namely arrays of counter-rotating vortices, short but flexible filaments can show simple random walks through their stretch-coil interactions with flow stagnation points. Here, we study the dynamics of semi-rigid…

Soft Condensed Matter · Physics 2021-08-18 Shi-Yuan Hu , Jun-Jun Chu , Michael J. Shelley , Jun Zhang

Small flexible fibers in a turbulent flow are found to be most of the time as straight as stiff rods. This is due to the cooperative action of flexural rigidity and fluid stretching. However, fibers might bend and buckle when they tumble…

Fluid Dynamics · Physics 2019-11-15 Sofia Allende , Christophe Henry , Jeremie Bec

Dynamics of flexible non-Brownian fibers in shear flow at low-Reynolds-number are analyzed numerically for a wide range of the ratios A of the fiber bending force to the viscous drag force. Initially, the fibers are aligned with the flow,…

Soft Condensed Matter · Physics 2015-10-28 Agnieszka M. Slowicka , Eligiusz Wajnryb , Maria L. Ekiel-Jezewska