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With the spread of COVID-19 over the world, the need arose for fast and precise automatic triage mechanisms to decelerate the spread of the disease by reducing human efforts e.g. for image-based diagnosis. Although the literature has shown…

We introduce the STEM (Science, Technology, Engineering, and Medicine) Dataset for Scientific Entity Extraction, Classification, and Resolution, version 1.0 (STEM-ECR v1.0). The STEM-ECR v1.0 dataset has been developed to provide a…

Information Retrieval · Computer Science 2020-07-29 Jennifer D'Souza , Anett Hoppe , Arthur Brack , Mohamad Yaser Jaradeh , Sören Auer , Ralph Ewerth

Language model (LM) pretraining has led to consistent improvements in many NLP downstream tasks, including named entity recognition (NER). In this paper, we present T-NER (Transformer-based Named Entity Recognition), a Python library for…

Computation and Language · Computer Science 2022-09-27 Asahi Ushio , Jose Camacho-Collados

Named Entity Recognition (NER) frequently suffers from the problem of insufficient labeled data, particularly in fine-grained NER scenarios. Although $K$-shot learning techniques can be applied, their performance tends to saturate when the…

Computation and Language · Computer Science 2023-11-14 Su Ah Lee , Seokjin Oh , Woohwan Jung

Named Entity Recognition (NER) plays a pivotal role in various Natural Language Processing (NLP) tasks by identifying and classifying named entities (NEs) from unstructured data into predefined categories such as person, organization,…

Accurate recognition of biomedical named entities is critical for medical information extraction and knowledge discovery. However, existing methods often struggle with nested entities, entity boundary ambiguity, and cross-lingual…

Computation and Language · Computer Science 2025-10-13 Tengxiao Lv , Ling Luo , Juntao Li , Yanhua Wang , Yuchen Pan , Chao Liu , Yanan Wang , Yan Jiang , Huiyi Lv , Yuanyuan Sun , Jian Wang , Hongfei Lin

So far, named entity recognition (NER) has been involved with three major types, including flat, overlapped (aka. nested), and discontinuous NER, which have mostly been studied individually. Recently, a growing interest has been built for…

Computation and Language · Computer Science 2021-12-21 Jingye Li , Hao Fei , Jiang Liu , Shengqiong Wu , Meishan Zhang , Chong Teng , Donghong Ji , Fei Li

The aim of Named Entity Recognition (NER) is to identify references of named entities in unstructured documents, and to classify them into pre-defined semantic categories. NER often aids from added background knowledge in the form of…

Computation and Language · Computer Science 2015-11-24 S. Thenmalar , J. Balaji , T. V. Geetha

The MultiCoNER II task aims to detect complex, ambiguous, and fine-grained named entities in low-context situations and noisy scenarios like the presence of spelling mistakes and typos for multiple languages. The task poses significant…

Computation and Language · Computer Science 2023-05-11 Long Ma , Kai Lu , Tianbo Che , Hailong Huang , Weiguo Gao , Xuan Li

Motivation: The proliferation of Biomedical research articles has made the task of information retrieval more important than ever. Scientists and Researchers are having difficulty in finding articles that contain information relevant to…

Computation and Language · Computer Science 2020-11-04 Harsh Patel

We consider the problem of Named Entity Recognition (NER) on biomedical scientific literature, and more specifically the genomic variants recognition in this work. Significant success has been achieved for NER on canonical tasks in recent…

Computation and Language · Computer Science 2020-06-16 Chaoran Cheng , Fei Tan , Zhi Wei

Recent multilingual named entity recognition (NER) work has shown that large language models (LLMs) can provide effective synthetic supervision, yet such datasets have mostly appeared as by-products of broader experiments rather than as…

Computation and Language · Computer Science 2025-12-17 Jonas Golde , Patrick Haller , Alan Akbik

Detecting COVID-19 patients using Computed Tomography (CT) images of the lungs is an active area of research. Datasets of CT images from COVID-19 patients are becoming available. Deep learning (DL) solutions and in particular Convolutional…

Image and Video Processing · Electrical Eng. & Systems 2023-11-16 Ridha Ouni , Haikel Alhichri

Recent studies have explored various approaches for treating candidate named entity spans as both source and target sequences in named entity recognition (NER) by leveraging large language models (LLMs). Although previous approaches have…

Computation and Language · Computer Science 2026-03-27 Sungwoo Han , Hyeyeon Kim , Jingun Kwon , Hidetaka Kamigaito , Manabu Okumura

Named entity recognition (NER) of chemicals and drugs is a critical domain of information extraction in biochemical research. NER provides support for text mining in biochemical reactions, including entity relation extraction, attribute…

Computation and Language · Computer Science 2020-12-22 Jian Liu , Lei Gao , Sujie Guo , Rui Ding , Xin Huang , Long Ye , Qinghua Meng , Asef Nazari , Dhananjay Thiruvady

In recent years, with the growing amount of biomedical documents, coupled with advancement in natural language processing algorithms, the research on biomedical named entity recognition (BioNER) has increased exponentially. However, BioNER…

Computation and Language · Computer Science 2020-09-22 Usman Naseem , Matloob Khushi , Vinay Reddy , Sakthivel Rajendran , Imran Razzak , Jinman Kim

Fine-grained Entity Recognition (FgER) is the task of detecting and classifying entity mentions to a large set of types spanning diverse domains such as biomedical, finance and sports. We observe that when the type set spans several…

Computation and Language · Computer Science 2019-05-01 Abhishek Abhishek , Sanya Bathla Taneja , Garima Malik , Ashish Anand , Amit Awekar

Although named entity recognition (NER) helps us to extract domain-specific entities from text (e.g., artists in the music domain), it is costly to create a large amount of training data or a structured knowledge base to perform accurate…

Computation and Language · Computer Science 2023-06-07 Kosuke Nishida , Naoki Yoshinaga , Kyosuke Nishida

Distantly supervised named entity recognition (DS-NER) has emerged as a cheap and convenient alternative to traditional human annotation methods, enabling the automatic generation of training data by aligning text with external resources.…

Computation and Language · Computer Science 2025-05-20 Yuyang Ding , Dan Qiao , Juntao Li , Jiajie Xu , Pingfu Chao , Xiaofang Zhou , Min Zhang

Named Entity Recognition (NER) is an important subtask of information extraction that seeks to locate and recognise named entities. Despite recent achievements, we still face limitations in correctly detecting and classifying entities,…

Information Retrieval · Computer Science 2018-09-07 Diego Esteves
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