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Graph databases (GDB) have recently been arisen to overcome the limits of traditional databases for storing and managing data with graph-like structure. Today, they represent a requirement for many applications that manage graph-like data,…

Databases · Computer Science 2016-09-08 Ali Ben Ammar

Knowledge graphs have proven to be effective for modeling entities and their relationships through the use of ontologies. The recent emergence in interest for using knowledge graphs as a form of information modeling has led to their…

Artificial Intelligence · Computer Science 2023-07-21 Ngoc Luyen Le , Marie-Hélène Abel , Philippe Gouspillou

Optimization has been becoming a central of studies in mathematic and has many areas with different applications. However, many themes of optimization came from different area have not ties closing to origin concepts. This paper is to…

Optimization and Control · Mathematics 2012-07-24 Mahyuddin K. M. Nasution

The ever-increasing amount of data in biomedical research, and in cancer research in particular, needs to be managed to support efficient data access, exchange and integration. Existing software infrastructures, such caGrid, support access…

Artificial Intelligence · Computer Science 2010-12-30 Alejandra Gonzalez-Beltran , Ben Tagger , Anthony Finkelstein

Ontologies have been known for their semantic representation of knowledge. ontologies cannot automatically evolve to reflect updates that occur in respective domains. To address this limitation, researchers have called for automatic…

Artificial Intelligence · Computer Science 2022-01-19 Samaa Elnagar , Victoria Yoon , Manoj A. Thomas

Many platforms for benchmarking optimization algorithms offer users the possibility of sharing their experimental data with the purpose of promoting reproducible and reusable research. However, different platforms use different data models…

Neural and Evolutionary Computing · Computer Science 2021-04-27 Ana Kostovska , Diederick Vermetten , Carola Doerr , Sašo Džeroski , Panče Panov , Tome Eftimov

Property graph manages data by vertices and edges. Each vertex and edge can have a property map, storing ad hoc attribute and its value. Label can be attached to vertices and edges to group them. While this schema-less methodology is very…

Databases · Computer Science 2019-04-22 Mingxi Wu

For a long time threat modeling was treated as a manual, complicated process. However modern agile development methodologies and cloud computing technologies require adding automatic threat modeling approaches. This work considers two…

Cryptography and Security · Computer Science 2023-03-21 Andrei Brazhuk

Relational data sources are still one of the most popular ways to store enterprise or Web data, however, the issue with relational schema is the lack of a well-defined semantic description. A common ontology provides a way to represent the…

Machine Learning · Computer Science 2018-01-31 Natalia Ruemmele , Yuriy Tyshetskiy , Alex Collins

Discovery gene-disease links is important in biology and medicine areas, enabling disease identification and drug repurposing. Machine learning approaches accelerate this process by leveraging biological knowledge represented in ontologies…

Machine Learning · Computer Science 2025-04-14 Catarina Canastra , Cátia Pesquita

Ontologies comprising of concepts, their attributes, and relationships are used in many knowledge based AI systems. While there have been efforts towards populating domain specific ontologies, we examine the role of document structure in…

Artificial Intelligence · Computer Science 2022-04-14 Abhay M Shalghar , Ayush Kumar , Balaji Ganesan , Aswin Kannan , Akshay Parekh , Shobha G

Large Language Models (LLMs) have shown remarkable capabilities across various domains, yet they struggle with knowledge-intensive tasks in areas that demand factual accuracy, e.g. industrial automation and healthcare. Key limitations…

Machine Learning · Computer Science 2025-09-10 Michael Banf , Johannes Kuhn

In an era dominated by data, the management and utilization of domain-specific language have emerged as critical challenges in various application domains, particularly those with industry-specific requirements. Our work is driven by the…

Artificial Intelligence · Computer Science 2024-10-08 Ricardo Di Pasquale , Soledad Represa

Ontologies can act as a schema for constructing knowledge graphs (KGs), offering explainability, interoperability, and reusability. We explore \emph{ontology-compliant} KGs, aiming to build both internal and external ontology compliance. We…

Information Retrieval · Computer Science 2026-03-31 Zhangcheng Qiang

Knowledge graphs have become the primary vehicle for data integration and are critical to the success of modern AI, but the diversity of KG modelling practices, from lightweight vocabularies to richly axiomatised ontologies, makes…

Artificial Intelligence · Computer Science 2026-05-26 Enrico Daga , Valentina Tamma , Terry Payne

Ontology is a general term used by researchers who want to share information in a specific domain. One of the hallmarks of the greatest success of a powerful manager of an organization is his ability to interpret unplanned and unrelated…

Computers and Society · Computer Science 2025-03-11 Neda Bagherzadeh , Saeed Setayeshi , Samaneh Yazdani

Retrieval-Augmented Generation (RAG) systems combine Large Language Models (LLMs) with external knowledge, and their performance depends heavily on how that knowledge is represented. This study investigates how different Knowledge Graph…

Information Retrieval · Computer Science 2025-11-11 Tiago da Cruz , Bernardo Tavares , Francisco Belo

We propose a new approach to querying graph databases. Our approach balances competing goals of expressive power, language clarity and computational complexity. A distinctive feature of our approach is the ability to express properties of…

Logic in Computer Science · Computer Science 2023-06-22 Jakub Michaliszyn , Jan Otop , Piotr Wieczorek

Data Spaces are an emerging concept for the trusted implementation of data-based applications and business models, offering a high degree of flexibility and sovereignty to all stakeholders. As Data Spaces are currently emerging in different…

Artificial Intelligence · Computer Science 2023-08-29 Maximilian Staebler , Frank Koester , Christoph Schlueter-Langdon

Ontology-based approaches for predicting gene-disease associations include the more classical semantic similarity methods and more recently knowledge graph embeddings. While semantic similarity is typically restricted to hierarchical…

Machine Learning · Computer Science 2021-06-01 Susana Nunes , Rita T. Sousa , Catia Pesquita