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We present FractionalDiffEq.jl, a comprehensive solver suite for solving fractional differential equations, featuring high-performance numerical algorithms in the Julia programming language. FractionalDiffEq.jl is designed to be…

Numerical Analysis · Mathematics 2025-06-10 Qingyu Qu , Wei Ruan

Motivation: Estimating model parameters from experimental observations is one of the key challenges in systems biology and can be computationally very expensive. While the Julia programming language was recently developed as a high-level…

Quantitative Methods · Quantitative Biology 2020-11-06 Paul F. Lang , Sungho Shin , Victor M. Zavala

Analog Quantum Computers are promising tools for improving performance on applications such as modeling behavior of quantum materials, providing fast heuristic solutions to optimization problems, and simulating quantum systems. Due to the…

Quantum Physics · Physics 2024-07-31 Zachary Morrell , Marc Vuffray , Sidhant Misra , Carleton Coffrin

We present an open-source Julia-based software toolkit for solving the phase problem using dual-space iterative algorithms. The toolkit is specifically designed for aperiodic crystals and quasicrystals, supporting general space group…

Other Condensed Matter · Physics 2025-11-19 Pavel Kalugin

We introduce QuiverTools, a new software package, available in both a SageMath and Julia version, to study quivers and their moduli spaces of representations. Its key features are the computation of general subdimension vectors, leading to…

Algebraic Geometry · Mathematics 2026-05-27 Pieter Belmans , Hans Franzen , Gianni Petrella

In this paper, we present Insertus.jl, the Julia package that can help the user generate a randomization sequence of a given length for a multi-arm trial with a pre-specified target allocation ratio and assess the operating characteristics…

Methodology · Statistics 2024-07-22 Yevgen Ryeznik , Oleksandr Sverdlov

PolyMAPS is an open-source library that helps researchers to initialize LAMMPS molecular dynamics simulations. It introduces an integrated workflow by combining preparation, launching, visualization, and analysis into a single Jupyter…

Chemical Physics · Physics 2023-11-14 Xiaoli Yan , Santanu Chaudhuri

A tutorial of the Mathematica package CGAlgebra, for conformal geometric algebra calculations is presented. Using rule-based programming, the 5-dimensional conformal geometric algebra is implemented and defined functions simplify the…

Mathematical Software · Computer Science 2022-07-01 E. Alejandra Ortiz-Duran , Jose L. Aragon

We prove a Julia inequality for bounded non-commutative functions on polynomial polyhedra. We use this to deduce a Julia inequality for holomorphic functions on classical domains in $\mathbb{C}^d$. We look at differentiability at a boundary…

Complex Variables · Mathematics 2017-08-22 John E. McCarthy , James E. Pascoe

This is a guide on how to create 3d printable models of tropical surfaces, curves, and combinations thereof. It uses Polymake to construct bounded models of the tropical objects, and OpenSCAD to thicken and export them to any common 3D…

Algebraic Geometry · Mathematics 2023-04-21 Herbert Gangl , Yue Ren , Ziva Urbancic

In this article, we introduce the adapted inverse iteration method to generate bicomplex Julia sets associated to the polynomial map $w^2+c$. The result is based on a full characterization of bicomplex Julia sets as the boundary of a…

Dynamical Systems · Mathematics 2015-03-13 C. Matteau , D. Rochon

Machine learning is driving development across many fields in science and engineering. A simple and efficient programming language could accelerate applications of machine learning in various fields. Currently, the programming languages…

Machine Learning · Computer Science 2020-05-19 Kaifeng Gao , Gang Mei , Francesco Piccialli , Salvatore Cuomo , Jingzhi Tu , Zenan Huo

An information service for mathematical software is presented. Publications and software are two closely connected facets of mathematical knowledge. This relation can be used to identify mathematical software and find relevant information…

Digital Libraries · Computer Science 2016-08-11 Sebastian Bönisch , Michael Brickenstein , Hagen Chrapary , Gert-Martin Greuel , Wolfram Sperber

We present FreeBird, an extensible Julia-based platform for computational studies of phase equilibria at generic interfaces. The package supports a range of system configurations, from atomistic solid surfaces to coarse-grained…

Statistical Mechanics · Physics 2025-12-19 Ray Yang , Junchi Chen , Douglas Thibodeaux , Robert B. Wexler

Julia has been heralded as a potential successor to Python for scientific machine learning and numerical computing, boasting ergonomic and performance improvements. Since Julia's inception in 2012 and declaration of language goals in 2017,…

Machine Learning · Computer Science 2024-12-23 Edward Berman , Jacob Ginesin

We present DataDeps.jl: a julia package for the reproducible handling of static datasets to enhance the repeatability of scripts used in the data and computational sciences. It is used to automate the data setup part of running software…

Software Engineering · Computer Science 2018-08-06 Lyndon White , Roberto Togneri , Wei Liu , Mohammed Bennamoun

Using the mathematical framework of information geometry, we introduce a novel method which allows one to efficiently determine the exact shape of simultaneous confidence regions for non-linearly parametrised models. Furthermore, we show…

Methodology · Statistics 2022-11-08 Rafael Arutjunjan , Bjoern Malte Schaefer , Clemens Kreutz

In this paper we present the development of an open-source simulation toolbox, PowerSimulationsDynamics.jl, to study the dynamic response of power systems, focusing on the requirements to model systems with high penetrations of…

Systems and Control · Electrical Eng. & Systems 2024-03-26 Jose Daniel Lara , Rodrigo Henriquez-Auba , Matthew Bossart , Duncan S. Callaway , Clayton Barrows

We introduce two new packages, Nemo and Hecke, written in the Julia programming language for computer algebra and number theory. We demonstrate that high performance generic algorithms can be implemented in Julia, without the need to resort…

Mathematical Software · Computer Science 2017-05-18 Claus Fieker , William Hart , Tommy Hofmann , Fredrik Johansson

Program synthesis -- the automatic generation of code given a specification -- is one of the most fundamental tasks in artificial intelligence (AI) and the dream of many programmers. Numerous synthesizers have been developed for program…

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