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The application of Shapley values to high-dimensional, time-series-like data is computationally challenging - and sometimes impossible. For $N$ inputs the problem is $2^N$ hard. In image processing, clusters of pixels, referred to as…

Quantitative Methods · Quantitative Biology 2024-09-30 Lauren Elborough , Duncan Taylor , Melissa Humphries

The suffix tree is a very important data structure in string processing, but it suffers from a huge space consumption. In large-scale applications, compressed suffix trees (CSTs) are therefore used instead. A CST consists of three…

Data Structures and Algorithms · Computer Science 2010-12-21 Simon Gog , Enno Ohlebusch

In this paper, we study a data caching problem in the cloud environment, where multiple frequently co-utilised data items could be packed as a single item being transferred to serve a sequence of data requests dynamically with reduced cost.…

Data Structures and Algorithms · Computer Science 2022-08-08 Jiashu Wu , Hao Dai , Yang Wang , Yong Zhang , Dong Huang , Chengzhong Xu

Speculative decoding is widely adopted to reduce latency in large language model (LLM) inference by leveraging smaller draft models capable of handling diverse user tasks. However, emerging AI applications, such as LLM-based agents, present…

Computation and Language · Computer Science 2025-10-09 Gabriele Oliaro , Zhihao Jia , Daniel Campos , Aurick Qiao

Indexing a set of strings for prefix search or membership queries is a fundamental task with many applications such as information retrieval or database systems. A classic abstract data type for modelling such an index is a trie. Due to the…

Data Structures and Algorithms · Computer Science 2024-03-11 Hideo Bannai , Keisuke Goto , Shunsuke Kanda , Dominik Köppl

Given string $S[1..N]$ and integer $k$, the {\em suffix selection} problem is to determine the $k$th lexicographically smallest amongst the suffixes $S[i... N]$, $1 \leq i \leq N$. We study the suffix selection problem in the cache-aware…

Data Structures and Algorithms · Computer Science 2009-02-11 Gianni Franceschini , Roberto Grossi , S. Muthukrishnan

A suffix tree is able to efficiently locate a pattern in an indexed string, but not in general the most recent copy of the pattern in an online stream, which is desirable in some applications. We study the most general version of the…

Data Structures and Algorithms · Computer Science 2014-07-15 N. Jesper Larsson

Deploying Machine Learning (ML) algorithms within databases is a challenge due to the varied computational footprints of modern ML algorithms and the myriad of database technologies each with its own restrictive syntax. We introduce an…

The suffix array $SA[1..n]$ of a text $T$ of length $n$ is a permutation of $\{1,\ldots,n\}$ describing the lexicographical ordering of suffixes of $T$, and it is considered to be among of the most important data structures in string…

Data Structures and Algorithms · Computer Science 2022-06-17 Dominik Kempa , Tomasz Kociumaka

This study presents a novel framework for smart search in digital archival systems, leveraging the capabilities of Large Language Models (LLMs) to enhance information retrieval. By employing a Retrieval-Augmented Generation (RAG) approach,…

Artificial Intelligence · Computer Science 2025-01-14 Ha Dung Nguyen , Thi-Hoang Anh Nguyen , Thanh Binh Nguyen

The recent proliferation of Data Grids and the increasingly common practice of using resources as distributed data stores provide a convenient environment for communities of researchers to share, replicate, and manage access to copies of…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Sudharshan Vazhkudai , Jennifer M. Schopf

The exponential growth of data storage demands has necessitated the evolution of hierarchical storage management strategies [1]. This study explores the application of streaming machine learning [3] to revolutionize data prefetching within…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-01-30 Chiyu Cheng , Chang Zhou , Yang Zhao , Jin Cao

An increasing number of scientific applications are making use of irregular data access patterns. An important class of such patterns involve subscripted-subscripts, wherein an array value appears in the index expression of another array.…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-11-15 Akshay Bhosale , Rudolf Eigenmann

Most of the fastest-growing string collections today are repetitive, that is, most of the constituent documents are similar to many others. As these collections keep growing, a key approach to handling them is to exploit their…

Information Retrieval · Computer Science 2017-05-22 Travis Gagie , Aleksi Hartikainen , Kalle Karhu , Juha Kärkkäinen , Gonzalo Navarro , Simon J. Puglisi , Jouni Sirén

This paper introduces new algorithms and data structures for quick counting for machine learning datasets. We focus on the counting task of constructing contingency tables, but our approach is also applicable to counting the number of…

Artificial Intelligence · Computer Science 2009-09-25 A. Moore , M. S. Lee

Analyzing the increasingly large volumes of data that are available today, possibly including the application of custom machine learning models, requires the utilization of distributed frameworks. This can result in serious productivity…

Databases · Computer Science 2019-08-20 Phanwadee Sinthong , Michael J. Carey

In today's data driven world, storing, processing, and gleaning insights from large-scale data are major challenges. Data compression is often required in order to store large amounts of high-dimensional data, and thus, efficient inference…

Machine Learning · Statistics 2018-09-11 Denali Molitor , Deanna Needell

Efficient text indexing data structures have enabled large-scale genomic sequence analysis and are used to help solve problems ranging from assembly to read mapping. However, these data structures typically assume that the underlying…

Genomics · Quantitative Biology 2016-04-13 Nitish Gupta , Komal Sanjeev , Tim Wall , Carl Kingsford , Rob Patro

Big data systems development is full of challenges in view of the variety of application areas and domains that this technology promises to serve. Typically, fundamental design decisions involved in big data systems design include choosing…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-04-29 Samiya Khan , Xiufeng Liu , Syed Arshad Ali , Mansaf Alam

The tremendous expanse of search engines, dictionary and thesaurus storage, and other text mining applications, combined with the popularity of readily available scanning devices and optical character recognition tools, has necessitated…

Databases · Computer Science 2012-07-04 Sourav Dutta , Arnab Bhattacharya