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We prove that there is a graph isomorphism test running in time $n^{\operatorname{polylog}(h)}$ on $n$-vertex graphs excluding some $h$-vertex graph as a minor. Previously known bounds were $n^{\operatorname{poly}(h)}$ (Ponomarenko, 1988)…

Data Structures and Algorithms · Computer Science 2023-05-30 Martin Grohe , Daniel Neuen , Daniel Wiebking

It is well-known that the graph isomorphism problem can be posed as an equivalent problem of determining whether an auxiliary graph structure contains a clique of specific order. However, the algorithms that have been developed so far for…

Data Structures and Algorithms · Computer Science 2019-10-29 Giannis Nikolentzos , Michalis Vazirgiannis

Line graph transformation has been widely studied in graph theory, where each node in a line graph corresponds to an edge in the original graph. This has inspired a series of graph neural networks (GNNs) applied to transformed line graphs,…

Machine Learning · Computer Science 2025-03-21 Fan Yang , Xingyue Huang

The classical Weisfeiler-Leman algorithm aka color refinement is fundamental for graph learning with kernels and neural networks. Originally developed for graph isomorphism testing, the algorithm iteratively refines vertex colors. On many…

Machine Learning · Computer Science 2022-12-09 Franka Bause , Nils M. Kriege

Weisfeiler-Leman Features (WLFs) are a recently introduced classical machine learning tool for learning to plan and search. They have been shown to be both theoretically and empirically superior to existing deep learning approaches for…

Artificial Intelligence · Computer Science 2025-08-27 Dillon Z. Chen

Colour refinement is a basic algorithmic routine for graph isomorphism testing, appearing as a subroutine in almost all practical isomorphism solvers. It partitions the vertices of a graph into "colour classes" in such a way that all…

Data Structures and Algorithms · Computer Science 2014-05-01 Martin Grohe , Kristian Kersting , Martin Mladenov , Erkal Selman

Designing expressive Graph Neural Networks (GNNs) is a fundamental topic in the graph learning community. So far, GNN expressiveness has been primarily assessed via the Weisfeiler-Lehman (WL) hierarchy. However, such an expressivity measure…

Machine Learning · Computer Science 2024-01-17 Bohang Zhang , Jingchu Gai , Yiheng Du , Qiwei Ye , Di He , Liwei Wang

Subgraph representation learning has been effective in solving various real-world problems. However, current graph neural networks (GNNs) produce suboptimal results for subgraph-level tasks due to their inability to capture complex…

Machine Learning · Computer Science 2025-11-12 Dongkwan Kim , Alice Oh

We devise a unified framework for the design of canonization algorithms. Using hereditarily finite sets, we define a general notion of combinatorial objects that includes graphs, hypergraphs, relational structures, codes, permutation…

Data Structures and Algorithms · Computer Science 2019-04-09 Pascal Schweitzer , Daniel Wiebking

We precisely characterize the expressivity of computable Recurrent Graph Neural Networks (recurrent GNNs). We prove that recurrent GNNs with finite-precision parameters, sum aggregation, and ReLU activation, can compute any graph algorithm…

Machine Learning · Computer Science 2026-03-17 Eran Rosenbluth , Martin Grohe

In these lecture notes, we first recall the connection between graph neural networks, Weisfeiler-Lehman tests and logics such as first-order logic and graded modal logic. We then present a modal logic in which counting modalities appear in…

Logic in Computer Science · Computer Science 2025-10-14 François Schwarzentruber

Invertible map equivalences are approximations of graph isomorphism that refine the well-known Weisfeiler-Leman method. They are parametrised by a number k and a set Q of primes. The intuition is that two graphs G and H which are equivalent…

Logic in Computer Science · Computer Science 2019-08-28 Anuj Dawar , Erich Grädel , Wied Pakusa

We study and compare different Graph Neural Network extensions that increase the expressive power of GNNs beyond the Weisfeiler-Leman test. We focus on (i) GNNs based on higher order WL methods, (ii) GNNs that preprocess small substructures…

Machine Learning · Computer Science 2022-02-01 Pál András Papp , Roger Wattenhofer

We propose a new type system for lambda-calculus ensuring that well-typed programs can be executed in polynomial time: Dual light affine logic (DLAL). DLAL has a simple type language with a linear and an intuitionistic type arrow, and one…

Logic in Computer Science · Computer Science 2016-08-31 Patrick Baillot , Kazushige Terui

A graph neural network (GNN) is a good choice for predicting the chemical properties of molecules. Compared with other deep networks, however, the current performance of a GNN is limited owing to the "curse of depth." Inspired by…

Machine Learning · Computer Science 2020-08-19 Katsuhiko Ishiguro , Kenta Oono , Kohei Hayashi

In this paper we show a new way of constructing deterministic polynomial-time approximation algorithms for computing complex-valued evaluations of a large class of graph polynomials on bounded degree graphs. In particular, our approach…

Combinatorics · Mathematics 2018-01-11 Viresh Patel , Guus Regts

We show that if $p=O(1/n)$, then the Erd\H{o}s-R\'{e}nyi random graph $G(n,p)$ with high probability admits a canonical labeling computable in time $O(n\log n)$. Combined with the previous results on the canonization of random graphs, this…

Discrete Mathematics · Computer Science 2024-10-02 Oleg Verbitsky , Maksim Zhukovskii

We combine dependent types with linear type systems that soundly and completely capture polynomial time computation. We explore two systems for capturing polynomial time: one system that disallows construction of iterable data, and one,…

Logic in Computer Science · Computer Science 2023-11-16 Robert Atkey

A classical difficult isomorphism testing problem is to test isomorphism of p-groups of class 2 and exponent p in time polynomial in the group order. It is known that this problem can be reduced to solving the alternating matrix space…

Data Structures and Algorithms · Computer Science 2017-10-03 Yinan Li , Youming Qiao

Large Language Models (LLMs) face significant limitations when applied to large-scale graphs, struggling with context constraints and inflexible reasoning. We present GraphChain, a framework that enables LLMs to analyze complex graphs…

Artificial Intelligence · Computer Science 2025-11-11 Chunyu Wei , Wenji Hu , Xingjia Hao , Xin Wang , Yifan Yang , Yueguo Chen , Yang Tian , Yunhai Wang